Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0925 ATGAGCTTTGAAATTAGCTTTTCAGGAGGTGGAGGTGGAGGTGATGTCTGTCAAGAGAAAACCAGAGAGAGGAGACATGCTGGTTCATGTTGTAAGGCAGGGACAAAGCCTGGTCGTGAAAAGTTGCGGAGGGAGAGACTCAATGAAAGGTTTTGTGACTTGAGGGTTGTTTTAGAACCTGGGAGACCTGCGAAAGCCGATAAAATGACTATACTTATGATGCTATCAGAGTTTTAA 237 0.443 MSFEISFSGGGGGGDVCQEKTRERRHAGSCCKAGTKPGREKLRRERLNERFCDLRVVLEPGRPAKADKMTILMMLSEF* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0925 78 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 74 IPR036638 GO:0046983
Ahy4g0925 78 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 31 78 IPR011598 GO:0046983
Ahy4g0925 78 Pfam Helix-loop-helix DNA-binding domain 34 74 IPR011598 GO:0046983
Ahy4g0925 78 Gene3D - 31 78 IPR036638 GO:0046983
Ahy4g0925 78 MobiDBLite consensus disorder prediction 1 32 - -
Ahy4g0925 78 MobiDBLite consensus disorder prediction 17 32 - -
Ahy4g0925 78 PANTHER BHLH TRANSCRIPTION FACTOR 17 72 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0925 Ahy-Chr4 17091952 17093810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0925 24 72 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 65.306 7.30e-15 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy4g0925 HLH 4.80E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0925 - - adu:110279904 139.428