Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0885 ATGAGAAAGCAAGTTTATGATCCAATTTGTCTTGATGTATTTGAGGATCATTTGGAATGGATATTGGAAGATTCACCACCATTTTTAACTCTTGAAGAAGTTGATTTAGATGATTTAGATCAATTGGATTTAGAAGATGATCGGGATGATGATGGAGCTAATGATTTTATGGAAAATATAAATCAAAATGAAACCAATCAGGAGGAAAAAGAATCTGTAGATATTATTGAGTTGAAGGATGATGATACGGAATTAAGTCATGAGCGGGCACAAGAATTCTACTCTAATTATGTAAAGAAAGTTGGGTTCGTCACTAAGATTAGGAACACCAATTTTGACAAGACAAAAAATGAATTCAGTTTATTCATTAACCTATCGATACATTGCAATCATGAAGGTTATCGGGAGTCTCGAGTAAAGACAGTATCTCAGGTAAAGAAAATAACAACCACAAGATGCAGAGCAATGATGTACGTGATGTTTGATAGACAGAAGGTTAAATGGATGGTGTCGAAATTAGAATTGAAGCATACCCACCCGTGTTTTGCTAAGCAATCTGTCCATTACCACGAATACAGAGAACCGACCATGCATGCTAAGTGTGTGATTGAGGACAACGATGAAGTTGACATACTGCCCAACAAGATGTACCTCGCACTGGCAAACAAGGTTGGTGGGTCGTCGAATATGAGTTACTCAAAAAAGGATGTGAGAAATTACATTACAAGTAATCTGCGTTGTGCTGACGAAAACGCTAATGTTAAGGAATTGTTGAGCTATTTCTTGCGAATGAAAGATATCAACCCAAATTTATTTTATGCAGTAGATGTCAACGCAGCTAACAAGTTTAGGAGTACGCTCTGGGTAGATGCAAGGTGTAGGCTATCCTACAAATATTATGGAGACGTGGCGTCGTTTGATACAATATATAGTAGAAACAAATATGTGTGTGTTTGTGTATCTATTGAAAGGCATAGACTACCATTTATATCTTTTGTTCGTGTCAACCATCACGAGAAGTCCACTATGCTTGGATGTGCTTTGCTGGGGAATGAGAAAATACGTAGCTTTGAGTGGGTCTTTACGCAACGGCTGAAGTGCATGAGAACTGCTCCACAGGCCATCATCACGGACTAG 1137 0.3799 MRKQVYDPICLDVFEDHLEWILEDSPPFLTLEEVDLDDLDQLDLEDDRDDDGANDFMENINQNETNQEEKESVDIIELKDDDTELSHERAQEFYSNYVKKVGFVTKIRNTNFDKTKNEFSLFINLSIHCNHEGYRESRVKTVSQVKKITTTRCRAMMYVMFDRQKVKWMVSKLELKHTHPCFAKQSVHYHEYREPTMHAKCVIEDNDEVDILPNKMYLALANKVGGSSNMSYSKKDVRNYITSNLRCADENANVKELLSYFLRMKDINPNLFYAVDVNAANKFRSTLWVDARCRLSYKYYGDVASFDTIYSRNKYVCVCVSIERHRLPFISFVRVNHHEKSTMLGCALLGNEKIRSFEWVFTQRLKCMRTAPQAIITD* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0885 378 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Ahy4g0885 378 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 378 IPR031052 GO:0006355
Ahy4g0885 378 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 84 378 - -
Ahy4g0885 378 Pfam MULE transposase domain 324 378 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0885 Ahy-Chr4 14951383 14953734 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy4g0885 FAR1 4.90E-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0885 - - ahf:112803266 418.313