Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0882 ATGGCTAGTAAGAGGTTCAAATGTGACTTTTGTTACCGCGAATTTGCAAATTCACAGGCACTAGGTGGCCATCAAAACGCTCACAAGAAAGAGCGTCGAAGAGCCACCTTAGCGCGCTTTCACCAACATTCGATGCCCTTTGTCTTTTTTCCTTCATCATCAGGATCAGTAGTTTCTCCGCATGGAAGGGCCCCACATCCAGTAATCTCTAACGGAGAACCTGATCCTGATGATGATGAAAAAGATCTATTAATTCCCGTTGTTATGATGAAAACAAATGAAGGTGATGGTGCAAGACAAAAAGGACCCTTTTTTGTGGAACAAGTACACAAGAATAGTGGTGATGATGATGTTGATCTTAACTTGAGGCTATAG 375 0.424 MASKRFKCDFCYREFANSQALGGHQNAHKKERRRATLARFHQHSMPFVFFPSSSGSVVSPHGRAPHPVISNGEPDPDDDEKDLLIPVVMMKTNEGDGARQKGPFFVEQVHKNSGDDDVDLNLRL* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0882 124 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Ahy4g0882 124 PANTHER ZINC FINGER PROTEIN 8-LIKE 3 124 - -
Ahy4g0882 124 Gene3D Classic Zinc Finger 1 46 - -
Ahy4g0882 124 SUPERFAMILY beta-beta-alpha zinc fingers 3 33 IPR036236 -
Ahy4g0882 124 MobiDBLite consensus disorder prediction 56 81 - -
Ahy4g0882 124 PANTHER ZINC FINGER PROTEIN 5 3 124 IPR044299 GO:0010090
Ahy4g0882 124 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0882 Ahy-Chr4 14848384 14848758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0882 3 48 C2H2 Transcription Factor Family AT1G67030 50.000 2.00e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0882 - - ahf:112794680 231.106