Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0872 ATGGCTTCTTCCCCTTCTTGTTCTAATTATTGTTACAACGGTAACAAGAGTTTGTTAGCATCGGTTATCGTGTCAGTTATCGTGGTAACAATAACGATAAGTAGTGGGGGCGTGGCAATTGCGGAAGGAGGGAGGGTGCCGTTTGCATGTGACCCGAAAAACGGTTTAACGAGGACGTTGAGATTCTGTTGGACGCACGTGCCAATCCACGTGAGGGTGCAGGACCTCATAGGGAGGCTCACATTGGCGGAGAAGATAAGGCTGGTGGTTAATAACGCCATAGCGGTTCCAAGGCTTGGGATTCAGGGCTATGAGTGGTGGTCGGAGGCCTTGCACGGTGTTTCTAATGTGGGCCCAGGGACTAAGTTCGGTGGGCCCTTCCCTGGTGCCACTAGCTTCCCTCAGGTCATCACAACCGCTGCTTCTTTCAACCAATCTCTATGGCTTGAAATCGGTCGGGTGGTGTCTGATGAAGCAAGGGCAATGTACAATGGTGGAGCTGCAGGGTTGACATTTTGGAGTCCTAATGTGAACATTTTTCGCGATCCTCGTTGGGGCCGTGGCCAGGAGACTCCTGGCGAAGACCCCACCTTGGCCGCAAAATATGCTGCAAGCTATGTGCAAGGACTCCAAGGCAACGGCGCGGGTGACCGGCTCAAGGTGGCTGCTTGTTGTAAACACTACACTGCCTATGATCTTGATAATTGGAACGGCATAGACAGATTTCATTTCAATGCCAAGGTTAGCAAGCAAGACTTGGCGGACACGTATGACGTACCATTCAAAGCTTGTGTGTTGGAAGGGAAGGTGGCTAGTGTCATGTGTTCCTACAATCAGGTCAATGGCAAGCCCACTTGTGCCGACCCCGAACTCCTTCGCAGCACCATCCGCGGCCAATGGGGTCTCAATGGGTACATTGTGTCGGATTGTGACTCGGTCGGAGTATACTATGATAGCCAACACTACACAAGGACGCCGGAAGAGGCGGCGGCGGATGCCATCAAAGCAGGCTTGGACTTGGACTGCGGCCCATTCTTGGCCATCCACACGGATGCGGCCATTAGACAAGGGCTCATTTCGGAGAACGATCTTAATCTTGCTTTGGCTAACCTTATTACGGTCCAAATGAGATTGGGCATGTTTGATGGTGAACCTTCGGCCCAACAGTATGGGAATTTGGGCCCAAGAGATGTGTGTACCCCGGCCCACCAGGAACTGGCCCTTGAGGCAGCTAGACAAGGCATCGTGTTGCTTGAAAACAAAGGGAACGCGTTGCCTTTATCCCCTACGCGGGTTCGCACCGTAGCTGTAATTGGGCCCAATTCAGATGTTACTGTTACAATGATAGGAAACTATGCTGGTGTTGCATGTGGCTACACATCACCATTACAAGGGATTTCAAGATATGTTAAGACCGTACATCAAGCAGGGTGCAGGGATGTTGCATGTGGAGGCAACCAACTATTTGGAGCCGCAGAGATCGCATCCAGGCGAACAGATGCAACAATACTTGTCATGGGCCTGGATCAGTCCATAGAGGCTGAGACTAGGGACAGGGTTGGGCTTCTCTTACCAGGCCTCCAACAGGAACTTGTGTCCAGAGTTGCCAGGGCCGCCAGGGGCCCAGTTGTCTTGGTTATCATGTCTGGTGGCCCGGTTGATGTCTCATTCGCCAAAAATGATCCCAAGATCACTGCAATTTTGTGGGCTGGTTATCCTGGCCAAGCTGGAGGAACTGCCATTGCTGATGTCATCTTTGGCAGAACCAATCCAGGTGGAAGGCTTCCAATGACATGGTACCCAGAAAGCTATCTATCGAAAGTGCCAATGACAATAATGGACATGCGTCCAAACCCATCAACAGGGTACCCAGGAAGAACCTACAGATTCTACAAGGGCCCAGTTGTGTACCCATTTGGGCATGGACTCAGCTATAGTAGATTCTCCCAAACCCTAGTACTTGCACCCAAACAAGTCTCAGTGTCCTTCTCAACTCCCCTCAAAGCCCAAACAAACTCAACTTGGGCCTCATCTTCAATCAAAGTGAGCCATGCAAATTGTGATGCCCTACATATGGGCTTCCATGTTGATGTGAAGAATGAAGGGTCAATGGATGGGACACATACCCTTTTGATTTTCTCTAAGCCACCAATTAACGGGAATAATAATTGGTCAGAGGATAAGAAATTGGTGAGTTTTCATAAAGTGCTTGTTCCTGCTGGATCAAAGCAAAGGGTTAGTGTTGGTGTTCATGTTTGCAAGCATTTGTCTGTTGTTGATGAATTTGGGGTCCGAAGGATCCCAATGGGTGACCATGAATTACATATCGGTGATCTCAAGCATTCTATTTCGGTCCAAACTCAAGACTAA 2370 0.4979 MASSPSCSNYCYNGNKSLLASVIVSVIVVTITISSGGVAIAEGGRVPFACDPKNGLTRTLRFCWTHVPIHVRVQDLIGRLTLAEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGPFPGATSFPQVITTAASFNQSLWLEIGRVVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVQGLQGNGAGDRLKVAACCKHYTAYDLDNWNGIDRFHFNAKVSKQDLADTYDVPFKACVLEGKVASVMCSYNQVNGKPTCADPELLRSTIRGQWGLNGYIVSDCDSVGVYYDSQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTDAAIRQGLISENDLNLALANLITVQMRLGMFDGEPSAQQYGNLGPRDVCTPAHQELALEAARQGIVLLENKGNALPLSPTRVRTVAVIGPNSDVTVTMIGNYAGVACGYTSPLQGISRYVKTVHQAGCRDVACGGNQLFGAAEIASRRTDATILVMGLDQSIEAETRDRVGLLLPGLQQELVSRVARAARGPVVLVIMSGGPVDVSFAKNDPKITAILWAGYPGQAGGTAIADVIFGRTNPGGRLPMTWYPESYLSKVPMTIMDMRPNPSTGYPGRTYRFYKGPVVYPFGHGLSYSRFSQTLVLAPKQVSVSFSTPLKAQTNSTWASSSIKVSHANCDALHMGFHVDVKNEGSMDGTHTLLIFSKPPINGNNNWSEDKKLVSFHKVLVPAGSKQRVSVGVHVCKHLSVVDEFGVRRIPMGDHELHIGDLKHSISVQTQD* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0872 789 Gene3D Immunoglobulins 670 789 IPR013783 -
Ahy4g0872 789 Pfam Glycosyl hydrolase family 3 C-terminal domain 415 645 IPR002772 GO:0004553|GO:0005975
Ahy4g0872 789 PANTHER BETA-D-XYLOSIDASE 1 26 788 - -
Ahy4g0872 789 Gene3D - 72 390 IPR036962 GO:0004553|GO:0005975
Ahy4g0872 789 PANTHER SUGAR HYDROLASE-RELATED 26 788 IPR044993 GO:0009044|GO:0045493
Ahy4g0872 789 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 415 648 IPR036881 GO:0004553|GO:0005975
Ahy4g0872 789 Gene3D - 401 646 IPR036881 GO:0004553|GO:0005975
Ahy4g0872 789 SUPERFAMILY (Trans)glycosidases 61 414 IPR017853 -
Ahy4g0872 789 Pfam Glycosyl hydrolase family 3 N terminal domain 129 344 IPR001764 GO:0004553|GO:0005975
Ahy4g0872 789 PRINTS Glycosyl hydrolase family 3 signature 295 313 IPR001764 GO:0004553|GO:0005975
Ahy4g0872 789 PRINTS Glycosyl hydrolase family 3 signature 133 152 IPR001764 GO:0004553|GO:0005975
Ahy4g0872 789 PRINTS Glycosyl hydrolase family 3 signature 221 237 IPR001764 GO:0004553|GO:0005975
Ahy4g0872 789 Pfam Fibronectin type III-like domain 727 778 IPR026891 -
Ahy4g0872 789 SMART Fn3_like_2 708 780 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0872 Ahy-Chr4 14670127 14679221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0872 11 788 Glycoside Hydrolase AT5G49360 72.821 0.0 1157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0872 - - aip:107639006 1558.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0959 14 15927221 15936624 Ahy4g0872 4 14670127 14679221 hybridization