Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0867 ATGGACGCCATTAATTCAGTGTTCGAACCTCTCAGAGAGTTTTCCAAGGACAGCGTAAGGCTCGTCAAGCGCTGTCATAAACCCGATCACAAAGAATATTTCAAGGTTGCTGTTCATACTGCAATCGGAATTACGGTTATGGGATTCGTTGGCTTCTTCGTCAAGCTCATCTTCATTCCTATTAACAACATCATCGTCGGATCTGGTTAG 210 0.4381 MDAINSVFEPLREFSKDSVRLVKRCHKPDHKEYFKVAVHTAIGITVMGFVGFFVKLIFIPINNIIVGSG* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0867 69 Gene3D Preprotein translocase SecE subunit 7 68 IPR023391 -
Ahy4g0867 69 PANTHER SEC61 GAMMA SUBUNIT 1 69 - -
Ahy4g0867 69 SUPERFAMILY Preprotein translocase SecE subunit 4 65 IPR023391 -
Ahy4g0867 69 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA-3 1 69 - -
Ahy4g0867 69 TIGRFAM secE_euk_arch: protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic 9 66 IPR008158 GO:0008320|GO:0015031|GO:0016020
Ahy4g0867 69 Hamap Protein translocase subunit SecE [secE]. 9 64 IPR001901 GO:0006605|GO:0006886|GO:0016020
Ahy4g0867 69 ProSitePatterns Protein secE/sec61-gamma signature. 14 42 IPR001901 GO:0006605|GO:0006886|GO:0016020
Ahy4g0867 69 Pfam SecE/Sec61-gamma subunits of protein translocation complex 13 65 IPR001901 GO:0006605|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0867 Ahy-Chr4 14597205 14597446 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0867 K07342 - gmx:100789824 123.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1237 16 22913000 22917448 Ahy4g0867 4 14597205 14597446 hybridization