Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0863 ATGATAGTAGTTGATAACAAAAGAGAACAGTGTGTCATTGTTTCAGCTGAGACTATTCTTTCTCTTTTCTTGGAATCCCAACTACAGGCCCTTCTCCACTGTCGGGTTGTAAGCTCTTCTTCATGTTCAATGATGATGGCGCAGCAACCAAGCTTAACGGGTCAACTTGTGGGTTCAGAGATACATGGCTTCCACACATTGCAAGACCTGGATGTTGAAAACACCATGGAGGAAGCAAAGAGCAGATGGCTTCGTCCCAATGAGATTCATGCTATACTCTCAAATTCCAAATATTTCACTATCCATGTCAAGCCAGTGAATAAGCCCAAAAGTGGTCGTATTATATTATTTGACCGCAAAATGCTTAGGAACTTTCGAAAAGATGGGTACAACTGGAAGAAGAAAAATGATGGGAAAACAGTTAAAGAAGCACATGAGCACTTAAAAGTTGGTAACGAAGAAAGGATACACGTATATTATGCACATGGCCAAGATAACCCAGGACTTGTTCGTAGATGTTATTGGTTGCTTGATAAGAGGCTGGAGCACATAGTCCTTGTTCATTACCGTGAAACACAAGAGTCACAAGTTTCTCCTGTCACACCTGTAAATTCTCATTCTAGTTCAGCCTCTGACCAACCATGGTTATCAGAAGAATTAGACTCAGGGACCAACACTGCTTATGCCAGTGGATTTAATGACAATTTGACGGTTGAGAGTCATGAAATGAAGCTTCATGAGCTTAATACACTTGAATGGGATGACCTCGTGCTTTCAAACGACAACACCTCTACAATAGCCACTAGTGGAAATGTTCAATCCTTTAATCAACAAAACCAAAGTTTTCTGAAAGGGAGCTCTGGCAATGTAGCAAGCAATTTGGTTCCAGAAATTCATTCTTTCAGTAAGTTAGCTCAGCCAATTGTTGAGAGCAATAGTGTTCCTTACAGTATTCCAGATAGTGTTGATTTTCAGAGGACTTCTCCTATCTCTTTAGCTGGTGTTGATTCCTCGAACACTTTGGTAAATCCAAGCTTGCAAAGTCAGGACAGCTTTGGAATGTGGATAAACAATATGATATCTGATTCGCCACCTTGTTCTGTTGAGTCAGCTCTTGAATCCTCAATTTCTTCGTCGGTTCAGGGGCAATATTCATCACTGGTGGCTGGTAATCAGCTATCTTCTCTGCCTGAACAAGTATTTACTATCACTGATGTGTCCCCGACATGGGCTTCTTCCACCGAGAAAACTAAGATCCTTGTAACTGGTTTATTTCATAATGACTATCAACACCTTGCAAAGTCCAATCTATATTGTGTCTGCAGTGATGCAAGTATTCCTGTAGAAACTGTTCAGCTTGGAGTCTACCGATGCTGGGTATCACCGCATTCTCCTGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCGTAAACCAATTAGTCAAGTTGTTAACTTTGAGTATCGGACACCACTATTGCACAATCCTACTGCTTTTATGGAACAGAAATACGACTGGGAAGAATTTCGACTTCAAATTAGGCTTACTAATTTGCTTTTTGATACAAAAAAGAGCCTTGATATTTTCTCTAGTAAAGTGTCACCCAAGTCGCTGAAAGAGGCTAGGAAATTTGCCTTTAAAACATCTTTTATTTCTAAAAGCTGGCAATACCTGATGAAATCAACTGAGGAAAATACAATTCCATTTCCACAAGCAAAAGATGACTTGTTTCAAATTGCTTTGAAAAACAGATTAAAGGAATGGCTTTTGGAACGAATCAGCTTAGGTGTTAAGACTACTGAACATGATAAACAAGGGCAAGGAGTAATTCATTTGTGTGCAATTCTGGGATATACTTGGGCTGTTTCTTTATTTTCATGGTCCGGCTTGTCTCTTGATTTCCGTGACAAATTTGGATGGACAGCTCTACACTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGGAACTCTTTTGTCTTTTGGGGCAAAGCCAAATTTGGTCACAGATCCAACTCCCCAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCTTATATTAAGGGCTATGATGGGTTAGCGGCTTATCTTTCAGAAAAGTCTCTGGTCGAGCAAGTCAATGACATGAACCTAGCCGGAAATATCAGTGGCCCACTGGAAACCACCACAGTGGATATAGGAAACACTGAGAACCTTACCGAGGACCAACTCTATCTCAAGGAGACACTGGCATCTTACCGCACTGCAGCTGAGGCAGCAGCACGGATACAATCTGCATTTAGGGAGCACTCTCTAAAATTGCGATCTATGAAAATTGAATCTTTAAGTCCAGAGGATCAAGAACGCCAAATAGTGGCAGCAATGAAGATCCAGCATGCTTTCCGCAACTATGAGACAAGGAAAACGATGGCAGCCGCTGCTCGAATCCAATATAGATACCGTACATTTAAGTTGAGAAGAGAATTTCTCCACATGAAACGCCAGGTTATTAGAATTCAGGCTGCTTTCAGGGGATTTCAAGCCAGGAAGCAATATCGCAAAATTATTTGGTCTGTTGGAGTGCTTGAGAAAGTAATCCTGCGTTGGCGTTTGAAGAGAAAAGGTTTCCGTGGTCTCCAGGTCAATCCTGACCAAGAAATGAAAGATGAGACACAGGGAAGCGACATAGAGGAGGACTTCTTTAGGACTAGTAGGAAACAAGCTGAAGAACGTGTTGAGAGGTCTGTCGTGCGTGTACAAGCCATGTTCCGTTCTAAGAAGGCACAAGAAGAGTACAGAAGGATGAAGCTGGCACATAATCAAGCACAGCTGGAGCTTGAATTTGAAGAACTACTGATTTGTGGAGATGACATGATAACGGAGAAGCAGTAA 2871 0.4159 MIVVDNKREQCVIVSAETILSLFLESQLQALLHCRVVSSSSCSMMMAQQPSLTGQLVGSEIHGFHTLQDLDVENTMEEAKSRWLRPNEIHAILSNSKYFTIHVKPVNKPKSGRIILFDRKMLRNFRKDGYNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGLVRRCYWLLDKRLEHIVLVHYRETQESQVSPVTPVNSHSSSASDQPWLSEELDSGTNTAYASGFNDNLTVESHEMKLHELNTLEWDDLVLSNDNTSTIATSGNVQSFNQQNQSFLKGSSGNVASNLVPEIHSFSKLAQPIVESNSVPYSIPDSVDFQRTSPISLAGVDSSNTLVNPSLQSQDSFGMWINNMISDSPPCSVESALESSISSSVQGQYSSLVAGNQLSSLPEQVFTITDVSPTWASSTEKTKILVTGLFHNDYQHLAKSNLYCVCSDASIPVETVQLGVYRCWVSPHSPGFVNLYLSFDGRKPISQVVNFEYRTPLLHNPTAFMEQKYDWEEFRLQIRLTNLLFDTKKSLDIFSSKVSPKSLKEARKFAFKTSFISKSWQYLMKSTEENTIPFPQAKDDLFQIALKNRLKEWLLERISLGVKTTEHDKQGQGVIHLCAILGYTWAVSLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVGTLLSFGAKPNLVTDPTPQNPGGCTAADLAYIKGYDGLAAYLSEKSLVEQVNDMNLAGNISGPLETTTVDIGNTENLTEDQLYLKETLASYRTAAEAAARIQSAFREHSLKLRSMKIESLSPEDQERQIVAAMKIQHAFRNYETRKTMAAAARIQYRYRTFKLRREFLHMKRQVIRIQAAFRGFQARKQYRKIIWSVGVLEKVILRWRLKRKGFRGLQVNPDQEMKDETQGSDIEEDFFRTSRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLAHNQAQLELEFEELLICGDDMITEKQ* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0863 956 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Ahy4g0863 956 Gene3D Immunoglobulins 397 491 IPR013783 -
Ahy4g0863 956 ProSiteProfiles Ankyrin repeat profile. 638 670 IPR002110 GO:0005515
Ahy4g0863 956 Coils Coil 918 938 - -
Ahy4g0863 956 Gene3D - 801 849 - -
Ahy4g0863 956 ProSiteProfiles IQ motif profile. 802 829 IPR000048 GO:0005515
Ahy4g0863 956 ProSiteProfiles Ankyrin repeat region circular profile. 638 666 - -
Ahy4g0863 956 Pfam Ankyrin repeats (3 copies) 583 667 IPR002110 GO:0005515
Ahy4g0863 956 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 61 951 - -
Ahy4g0863 956 SMART iq_5 904 926 IPR000048 GO:0005515
Ahy4g0863 956 SMART iq_5 824 846 IPR000048 GO:0005515
Ahy4g0863 956 SMART iq_5 782 804 IPR000048 GO:0005515
Ahy4g0863 956 Gene3D - 569 710 IPR036770 -
Ahy4g0863 956 ProSiteProfiles CG-1 DNA-binding domain profile. 72 198 IPR005559 GO:0003677
Ahy4g0863 956 ProSiteProfiles IQ motif profile. 825 849 IPR000048 GO:0005515
Ahy4g0863 956 ProSiteProfiles IQ motif profile. 906 934 IPR000048 GO:0005515
Ahy4g0863 956 SUPERFAMILY E set domains 402 489 IPR014756 -
Ahy4g0863 956 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 61 951 - -
Ahy4g0863 956 SMART CG_1_2 76 193 IPR005559 GO:0003677
Ahy4g0863 956 SMART ANK_2a 638 667 IPR002110 GO:0005515
Ahy4g0863 956 SMART ANK_2a 677 708 IPR002110 GO:0005515
Ahy4g0863 956 Pfam CG-1 domain 78 191 IPR005559 GO:0003677
Ahy4g0863 956 SUPERFAMILY Ankyrin repeat 576 700 IPR036770 -
Ahy4g0863 956 MobiDBLite consensus disorder prediction 195 218 - -
Ahy4g0863 956 Pfam IQ calmodulin-binding motif 829 846 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0863 Ahy-Chr4 14415918 14423137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0863 76 938 CAMTA Transcription Factor Family AT3G16940 55.505 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Ahy4g0863 Ank_2 1.30E-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0863 K21596 - gmx:100819198 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0955 14 15709644 15716843 Ahy4g0863 4 14415918 14423137 hybridization
Ahy11g2632 11 142575928 142582829 Ahy4g0863 4 14415918 14423137 PCT
Ahy4g0863 4 14415918 14423137 Ahy11g2632 11 142575928 142582829 PCT