Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0833 ATGGAGTCAACTACCCCCTTCTTCTCCATCATCACGACCCTTATCTTCTACTCCTTAGTCTCACTCTCAGCTTCTTCAAATCCAAACAATCCATTCCCAAAAGAAGCTCTTCCTACTAAATCTGGTTACCTCCCAGTAAGTACATCATCTTCCTCTGCTATCTTCTATGCTTTCTATGAAGCTCATAACTCAACTTTACCTCTCTCCCAAACCCCTCTTCTCATTTGGCTCCAAGGTGGTCCCGGATGCTCCTCCATGATTGGCAACTTCTATGAGCTTGGACCATGGACTCTCACTGATGAATCACCCCTTACACTTCACCCTAACCCTGGTGCTTGGAACAGGATCTTTGGTCTCCTCTTTCTTGATAACCCCATTGGTTCTGGATTCAGTGTAGCAGCAACAACACAAGAAATCCCAACTGATCAAGATGGTGTTGCAAAGCATCTCTTTGCTGCTATAACAAGGTTTGTTGAGCTTGATCCTGTTTTCAAGAACCGTCCTATTTATATTACTGGTGAAAGTTATGCTGGGAAGTATGTTCCTGCTATTGGATACTATATATTAAAGGAGAATTGGCGGCTGCGCGGTTCTAAGAGAGTGAATTTGGCTGGTTTGGCTATTGGAGATGGGTTGACTGACCCTGTTACACAAGTGGTTACTCATGCTGTTAATGCTTATTATATTGGTTTGATCAATGAGAGGCAGAGGAATGAGTTGGAGAAGGATCAATTGGAAGCGGTTAGGTTAGCGCAGATTGGGAATTGGAGCGCTGCAACTGATGCAAGGAATGTGGTTTTGCGAAAGTTGAGGAATGTAACAGGGTTGGCTACTTTGTTTGATTACACAAGGAAAAAGCCCTATGGCGATGATGTAGTGGATAAATTCTTGAACAATGTGGAAGCTAAGAAGGCCTTAGGGGTGAAGAATGAGTCACTTGTGTTTGAAGGATGCAGCGATGTGGTTGGCGCCGTGTTACATGCTGATGTGATGAAGAGTGTGAAGTACATGGTAGAGGAATTGGTGAGGAACACTAGGGTGTTGTTATATCAAGGTCAGCATGATATTCAGGATGGAGTGGTTCAGGTCGAGGCGTGGGTGAAGACGATGAAGTGGGAAGGGATTGAGGATTTTTTGAATGCAGAGAGGAAGATATGGAAGGTGAACGGAGAGCTTGCTGGCTATGTCCAACAATGGAAGTCACTCACTAATGTTGTGGTGTTAGGGGCAGGGCATCTTTTACCTTCTGATCAACCTGTGACATCTCAAGCAATGATTGAAGATTGGGTCCTTGAAAAAGGTTTATTTCAAAGTTTGCAGCATCATGAAAATGTGTCAAGAAATTCATTGTGA 1353 0.4375 MESTTPFFSIITTLIFYSLVSLSASSNPNNPFPKEALPTKSGYLPVSTSSSSAIFYAFYEAHNSTLPLSQTPLLIWLQGGPGCSSMIGNFYELGPWTLTDESPLTLHPNPGAWNRIFGLLFLDNPIGSGFSVAATTQEIPTDQDGVAKHLFAAITRFVELDPVFKNRPIYITGESYAGKYVPAIGYYILKENWRLRGSKRVNLAGLAIGDGLTDPVTQVVTHAVNAYYIGLINERQRNELEKDQLEAVRLAQIGNWSAATDARNVVLRKLRNVTGLATLFDYTRKKPYGDDVVDKFLNNVEAKKALGVKNESLVFEGCSDVVGAVLHADVMKSVKYMVEELVRNTRVLLYQGQHDIQDGVVQVEAWVKTMKWEGIEDFLNAERKIWKVNGELAGYVQQWKSLTNVVVLGAGHLLPSDQPVTSQAMIEDWVLEKGLFQSLQHHENVSRNSL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0833 450 Gene3D alpha/beta hydrolase 18 441 IPR029058 -
Ahy4g0833 450 PANTHER CARBOXYPEPTIDASE 20 437 - -
Ahy4g0833 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 437 IPR001563 GO:0004185|GO:0006508
Ahy4g0833 450 Pfam Serine carboxypeptidase 36 430 IPR001563 GO:0004185|GO:0006508
Ahy4g0833 450 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Ahy4g0833 450 SUPERFAMILY alpha/beta-Hydrolases 38 431 IPR029058 -
Ahy4g0833 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Ahy4g0833 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Ahy4g0833 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Ahy4g0833 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0833 Ahy-Chr4 13253785 13255824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0833 292 430 Calmodulin-binding Proteins AT2G22960 23.239 6.20e-10 56.6