Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0828 ATGGGAACTTCAGAAGCAAAAGAAGAAGAGCTTGTGAAGAAGATAGAGAAGCTTGAAGCTGGCCATGTTCAGCTGAAGCATGAGATGTCGAAGCTGAAGCTATCTGAACGCCGCCATCATTACCGCCACAGGTCGCACTCCTTGTCGCCGCAGCGTTCGAGGCTTGGCGGTTGTGGCGGTGGCGGGAGTGCTGCTGCTGGTTGTAACAACAAAGGGTCTTCTTCTTCACCCTTGAAGAGGGAGAGTCGCAGCAGCAATAATCATAATCATAATCACAATCAGAACCAGAATCAGAATGAAGATGGTGATGGTGATTGTGATGGTGATGGTGATGTTGTTGGTGTGAATGTTGGCCTTAGTGAGAAGCAGTATATGAACATTTTGCAGTCAATGGGGCACTCGCTTCATATTCTGGATCTTCAATGCCGGATTATATATTGGAATCCTAGTGCCGAAAATCTGTATGGTTATGCAGCAGTAGAGGCTCTTGGGAAAGATGGGATTGAGCTGCTTGTAGACCCTATTGATTTCGGCTTAGCATATGATGTTTTCAACCATGTCACTGTGGGGGAGAGTTGGAGCGGTCAGTTCCCTGCCAAGAACAAGATGGGGGAGAAATTTTCAGTTGTGGCAACCAACACACCATTCTATGATGACGATAGGAAGTTGATTGGGGTTATCTGTGTGTCCATTGATTCTAGACCCTTTCTTGAAACTCGAGCTACTTTATCAGATGTGAAGAATGCTGCACCAGGTTCAGACTTGGATTATAACCACGCGAAGAGTGGCATTTCAAATAAACTTGGCCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTAGCATCCAAAATTTCTAATTTGAAAGAGGATGGTAATTCCAGTGGAGCTAGCACTCCCAGAGGTGATGTACCACCTCCATTCAGTGTATTTTGTCATGTTGAAGAGAAATCACCAGCTAAATCTTTGAGAGACTCTGGTGATGATGGCGAAGGAAAACCAATTCACAAGATCATAACTTCTAAAGCTGAAGCATGGATTCAAAAGAGAACATTGTCATGGCCATGGAGAGGAAATGGTCAAGCTGGATCCGAGGCAAGAAATGTTCCTGTTGCTAGGCCACTGGTACAGAATGATCAAGAACATGAGCTGGTTAATCAGATGAATCTTTCTTCCGAGTCCAAGATGGAAGTCCAGGCAGGTAATCGGCCTGTTAATAATGAGGCTTCAGGATCGTGGTCCTCAGTTAACGTTAACAGTACTAGCAGTACCAGCAGCTGCGGCAGTGGCAGCAGTGGTGCTGTCAATAATAAAGTGGATATTGATACCGATTGCTTGGATTATGAAATCTTGTGGGAGGACCTCACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCCCTGTGGTATGGATCAGATGTTGCGGTCAAAGTATTCTTAAAGCAAGAATATTCAGAGGATGTGATACTATCCTTCAGACAAGAGGTGTCTGTCTTGAAAAGACTTCGCCATCCAAATATTATTCTCTTCATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCGTTTGCTCCAAAGAAATACATCCAAACTTGACTGGAGACGGCGAGTTCATATGGCTTTAGATATCGCACGTGGTGTGAATTATCTTCATCGTTGCAGCCCCCCTATTGTTCATCGAGATTTGAAGTCTTCAAATCTCCTAGTTGACAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGCCTTAAGCATGAAACATATCTCACAACCAAAACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGAAATGAACCCTCGGATGAGAAGTCCGATGTGTACAGCTTTGGGGTGATATTGTGGGAACTTGCAACTGAAAAGATCCCGTGGGATACTCTCAATGCAATGCAGGTTATTGGGGCTGTAGGGTTTATGAACCATCGGTTAGAAATTCCGGCAGATGTTGATCCGCAGTGGGCTTCTATAATGGAGAGCTGCTGGCATAGCGATCCGGCTCAGCGACCAACATTCCAGGAACTTGTGGAAAGGCTCAGAGAAATGCAGAGACGACATGCCATTCAGCTCCAGGCGGCTCGTTCTGCCAGCGGTGGAAGCAATCAGAAGGAATCTTAA 2199 0.4557 MGTSEAKEEELVKKIEKLEAGHVQLKHEMSKLKLSERRHHYRHRSHSLSPQRSRLGGCGGGGSAAAGCNNKGSSSSPLKRESRSSNNHNHNHNQNQNQNEDGDGDCDGDGDVVGVNVGLSEKQYMNILQSMGHSLHILDLQCRIIYWNPSAENLYGYAAVEALGKDGIELLVDPIDFGLAYDVFNHVTVGESWSGQFPAKNKMGEKFSVVATNTPFYDDDRKLIGVICVSIDSRPFLETRATLSDVKNAAPGSDLDYNHAKSGISNKLGLDSQQPLQVALASKISNLKEDGNSSGASTPRGDVPPPFSVFCHVEEKSPAKSLRDSGDDGEGKPIHKIITSKAEAWIQKRTLSWPWRGNGQAGSEARNVPVARPLVQNDQEHELVNQMNLSSESKMEVQAGNRPVNNEASGSWSSVNVNSTSSTSSCGSGSSGAVNNKVDIDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFLKQEYSEDVILSFRQEVSVLKRLRHPNIILFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLDWRRRVHMALDIARGVNYLHRCSPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDTLNAMQVIGAVGFMNHRLEIPADVDPQWASIMESCWHSDPAQRPTFQELVERLREMQRRHAIQLQAARSASGGSNQKES* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0828 732 Gene3D Phosphorylase Kinase; domain 1 447 531 - -
Ahy4g0828 732 MobiDBLite consensus disorder prediction 33 109 - -
Ahy4g0828 732 Gene3D Transferase(Phosphotransferase) domain 1 532 732 - -
Ahy4g0828 732 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 288 730 - -
Ahy4g0828 732 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 30 287 - -
Ahy4g0828 732 CDD PAS 137 232 IPR000014 -
Ahy4g0828 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Ahy4g0828 732 Coils Coil 8 35 - -
Ahy4g0828 732 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 232 IPR035965 -
Ahy4g0828 732 ProSiteProfiles Protein kinase domain profile. 454 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0828 732 TIGRFAM sensory_box: PAS domain S-box protein 120 232 IPR000014 -
Ahy4g0828 732 Pfam Protein tyrosine and serine/threonine kinase 454 706 IPR001245 GO:0004672|GO:0006468
Ahy4g0828 732 SUPERFAMILY Protein kinase-like (PK-like) 443 706 IPR011009 -
Ahy4g0828 732 MobiDBLite consensus disorder prediction 394 432 - -
Ahy4g0828 732 Gene3D PAS domain 133 234 - -
Ahy4g0828 732 PRINTS Tyrosine kinase catalytic domain signature 633 655 IPR001245 GO:0004672|GO:0006468
Ahy4g0828 732 PRINTS Tyrosine kinase catalytic domain signature 677 699 IPR001245 GO:0004672|GO:0006468
Ahy4g0828 732 PRINTS Tyrosine kinase catalytic domain signature 614 624 IPR001245 GO:0004672|GO:0006468
Ahy4g0828 732 PRINTS Tyrosine kinase catalytic domain signature 528 541 IPR001245 GO:0004672|GO:0006468
Ahy4g0828 732 PRINTS Tyrosine kinase catalytic domain signature 567 585 IPR001245 GO:0004672|GO:0006468
Ahy4g0828 732 MobiDBLite consensus disorder prediction 287 308 - -
Ahy4g0828 732 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 288 730 - -
Ahy4g0828 732 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 287 - -
Ahy4g0828 732 SMART pas_2 122 189 IPR000014 -
Ahy4g0828 732 CDD STKc_MAP3K-like 460 706 - -
Ahy4g0828 732 ProSiteProfiles PAS repeat profile. 120 191 IPR000014 -
Ahy4g0828 732 MobiDBLite consensus disorder prediction 67 101 - -
Ahy4g0828 732 Pfam PAS domain 137 232 IPR000014 -
Ahy4g0828 732 SMART serkin_6 454 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0828 Ahy-Chr4 12984513 12991469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0828 9 723 MAP Kinase Kinase Kinase AT3G06620 54.161 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Ahy4g0828 PK_Tyr_Ser-Thr 1.60E-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0916 14 14775080 14781661 Ahy4g0828 4 12984513 12991469 hybridization
Ahy11g2656 11 142776265 142780632 Ahy4g0828 4 12984513 12991469 PCT
Ahy1g2280 1 100756544 100761605 Ahy4g0828 4 12984513 12991469 PCT
Ahy4g0828 4 12984513 12991469 Ahy11g2656 11 142776265 142780632 PCT
Ahy4g0828 4 12984513 12991469 Ahy1g2280 1 100756544 100761605 PCT