Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0825 ATGGCTTCTTCTTTTCATGCTTCTTCAGCAATAATATCATCCATAATAGTGTCAATAATTATTCTCATTTGCATGCCATGTTCTGCTTTTGGCTTTATTAATGAGAAAGAGGTTATAGATGCTCCTTTGTTAACACAAAAGTTAGGAATTAATCGCACCATCAAAGTAGATATTAATGGCAATGGGGACTTCAAATCTGTTCAAGCTGCCATTGATTCCATTCCCGAAGGGAATTCCAATTGGGTCATTCTCCATGTTAGGAAAGGAGTATACAGAGAAAAGGTACACATACCAAAGACTAAGCGTTACATATTCATGAGAGGGAATGGAAAGGGAAGAACAGCCATAGTTTGGTCTCAAAGCTCCTCCGATAACATTGATTCTGCTACCTTCAAAGTTGAAGCCCGTGATTTCATTGCATTTGGAATTAGCTTCAAGAACGAAGCACCAACGGGTATTGCATATACCTCACAGAATCAATCGGTGGCAGCATCTGTGGCTGCAGACAAAATTGCATTTTACCATTGTGCATTTTTCAGTACTCATAACACTCTCTTTGATTACAAAGGCAGACACTACTATGAGTCTTGCTACATTCAAGGCTCAATTGATTTCATTTTTGGCCGTGGCAGATCCATCTTTGAGGGGTGTGAGATATTTGTAATTGATGACAAAAGGGTCACAATTCATGGGTCAATCACAGCACAAAACAGGGAGAGTGAACGAGAGATAAGTGGATTCATATTCAATAAATGCAGGGTTTATGGCATTGGTGGGGTGTACCTAGGAAGGGCTAAGGGTCCTTATTCTAGGACCATTTTTGCTCACTCTTATCTCTCCAAGACTGTTGTTCCTGAGGGTTGGACCAATTGGAGCTATGATGGTCCCACAAAGAATCTGTATCATGCTGAGTACAAGTGCTATGGACCAGGAGCCACAAGAGAGGGAAGAGCTTCATGGTCAAGACAACTTAGTGATCAAGAAGTTGCTTCATTTTTGTCTGTTGATTACATAGATGGCAAGAATTGGTTGCCAGCGTGGCACTAA 1047 0.4078 MASSFHASSAIISSIIVSIIILICMPCSAFGFINEKEVIDAPLLTQKLGINRTIKVDINGNGDFKSVQAAIDSIPEGNSNWVILHVRKGVYREKVHIPKTKRYIFMRGNGKGRTAIVWSQSSSDNIDSATFKVEARDFIAFGISFKNEAPTGIAYTSQNQSVAASVAADKIAFYHCAFFSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFEGCEIFVIDDKRVTIHGSITAQNRESEREISGFIFNKCRVYGIGGVYLGRAKGPYSRTIFAHSYLSKTVVPEGWTNWSYDGPTKNLYHAEYKCYGPGATREGRASWSRQLSDQEVASFLSVDYIDGKNWLPAWH* 349
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0825 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 347 - -
Ahy4g0825 348 Gene3D - 48 348 IPR012334 -
Ahy4g0825 348 PANTHER PECTINESTERASE 67-RELATED 13 347 - -
Ahy4g0825 348 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
Ahy4g0825 348 Pfam Pectinesterase 55 340 IPR000070 GO:0030599|GO:0042545
Ahy4g0825 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy4g0825 Ahy-Chr4 12944433 12946539 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0825 51 344 Carbohydrate Esterase AT5G47500 39.145 5.67e-73 229
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0825 - - mtr:MTR_2g033970 560.451