Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0824 ATGGCTATGGATTTGAATAGGATCTTCATTGTTGACAGTGTTGTTGTGTTTGGAGTTTGCATAGTTATGGCCATGTTGTTTAAGGTTTCAACTACCTCACAAGATTCATCAACTGCAAATTTTGTGTTTGGAGATTCTCTTGTTGATGTAGGGAACAATAACTACATTCCCACTCTCACGAGGGCTAACTACGTTCCTTTTGGCATTGATTTTGGCAAACCAACAGGGAGGTTCACAAATGGAAGAACCATTGTTGATATCATTGGTGAGGAACTAGCAATGGGTTATACTCCACCTTATTTGGCTCCAACCACAGTTGGACCAGTGATTCTAAAGGGTGTCAACTATGCCTCAGGTGGAAGTGGAATCCTCAATCTCACTGGAAAAATCTTTGGTGGAAGAATAAACTTGGATGCACAATTAGATAACTTTGAAAACACAAGGCAAGACATTATTTCAAGCATTGGGGTTACTGCAGCTGTTGATCTATTAAGAAGAGGACTGTTCTCAGTAACAATTGGTTCAAACGATTTCATCAATAACTATCTAACACCAGGAGTCACCATTGCTGAGCAGAAGTTGACAACTCCACAAGTCTTTGTCAACACCATGATTTCAAAATTCAGAATGCAACTCACTAGGTTATTCAATCTTGGAGCAAGAAAAATCATAGTGGTGAATGTGGGGCCCATTGGGTGCATCCCAAATCAAAGGGATACAAACATAGATGCTGGAGATAATTGTGCCACATTCCCCAATCAGTTAGCTCAATTGTTTAACACCCAATTGAAGGGTCTTGTTGCTGAGCTCAGTGCAAATTTGAAGGGTTCAATGTTTGTTTATGCAGATGTTTACACCATCTTGGAAGATATATTCAGCAATTATATGGAATATGGTTTTGCAAACCCATCATCATCTTGTTGTTCCTTCGCTGGGAGATTTGGAGGTTTAGTCCCATGTGGTCCATCATCAAGAGTATGCATGGACAGATCAAAGTATGTGTTTTGGGACCCTTATCATCCAACTGATGCTGCTAATATTTTTATAGCCAAACGTTTGTTAGATGGTTCTCACAATGATATTTATCCAATGAATGTTCGTCAACTCTTTCATGCTTCTTCATGA 1125 0.3938 MAMDLNRIFIVDSVVVFGVCIVMAMLFKVSTTSQDSSTANFVFGDSLVDVGNNNYIPTLTRANYVPFGIDFGKPTGRFTNGRTIVDIIGEELAMGYTPPYLAPTTVGPVILKGVNYASGGSGILNLTGKIFGGRINLDAQLDNFENTRQDIISSIGVTAAVDLLRRGLFSVTIGSNDFINNYLTPGVTIAEQKLTTPQVFVNTMISKFRMQLTRLFNLGARKIIVVNVGPIGCIPNQRDTNIDAGDNCATFPNQLAQLFNTQLKGLVAELSANLKGSMFVYADVYTILEDIFSNYMEYGFANPSSSCCSFAGRFGGLVPCGPSSRVCMDRSKYVFWDPYHPTDAANIFIAKRLLDGSHNDIYPMNVRQLFHASS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0824 374 CDD SGNH_plant_lipase_like 38 357 IPR035669 -
Ahy4g0824 374 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 26 371 - -
Ahy4g0824 374 Pfam GDSL-like Lipase/Acylhydrolase 41 352 IPR001087 GO:0016788
Ahy4g0824 374 SUPERFAMILY SGNH hydrolase 42 355 - -
Ahy4g0824 374 Gene3D SGNH hydrolase 27 358 IPR036514 -
Ahy4g0824 374 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 26 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0824 Ahy-Chr4 12910539 12913065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0824 39 372 Acyl Lipid Metabolism Gene Families AT4G10950 36.795 2.60e-73 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0824 - - gmx:100815323 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0908 14 14651517 14654407 Ahy4g0824 4 12910539 12913065 hybridization
Ahy1g2707 1 106370435 106376756 Ahy4g0824 4 12910539 12913065 PCT
Ahy4g0824 4 12910539 12913065 Ahy1g2707 1 106370435 106376756 PCT