Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy4g0822 | ATGATGAATCTTCTTTCTCTATGTTGGAAGCCGTTCGGCCACGGCGGCGGTGATGCTGTCTCTTCCGCCGCCGGAAGGGAAGGCAAGGACGGCCTTCTCTGGTTCCGCGATGTCGGAAGGTACGGCTCCGGCGAATTCTCGATGGCCGTTGTCCAGGCTAACCAGGTCCTCGAGGATCAGAGCCAGATCGAGTCCGGTCCCCTCGGAACCTTCGTCGGCGTCTACGACGGCCACGGTGGCCCCGACGCCTCACGCTATGTCTGCGATAACTTGTTCCGCAACTTTCAAGCTGCGTCAGCTGAGTCACAGGGGGTTGTGACGGCCGAGACTATTCAAACTGCGTTCCGGAGAACTGAGGAAGGGTTCACTGCTCTTGTTTCTGATCTGTGGAGTACTCGGCCTCAAGTTGCCACTACCGGGACATGCTGTCTGGTTGGAGTGATCTTCCAGCAGACGCTATTCGTGGCGAATCTAGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAACACTGGTGGGGTAGCAGCGATTCAGCTATCTGCTGAACACAATGCAAATCTTGAGGCTGTTAGGCAGGAGCTTAAAGAATTGCATCCTGATGATCCCCAAATTGTTGTCCTTAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGATGGTTTATGGGAGCACCTGAGTAATGAAAGAGCAGTGGATATTGTTCACAGCAATCCACGTGTGGGTAGTGCGAAGAGGCTAGTGAAGGCTGCACTACAGGAAGCAGCAAGAAAACGAGAAATGAGATATTCAGACCTGAGGAAGATAGACAAGAAGGTTCGGCGCCATTTTCACGATGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATCTCCAGAGGCACCCTTCTCCACCCTCCACTATCCATTCGCAGCGCCCTCGATCACTGA | 954 | 0.5157 | MMNLLSLCWKPFGHGGGDAVSSAAGREGKDGLLWFRDVGRYGSGEFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDNLFRNFQAASAESQGVVTAETIQTAFRRTEEGFTALVSDLWSTRPQVATTGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSAEHNANLEAVRQELKELHPDDPQIVVLKHGVWRVKGIIQVSRSIDGLWEHLSNERAVDIVHSNPRVGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTLLHPPLSIRSALDH* | 318 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy4g0822 | 317 | PANTHER | ALPHABET, ISOFORM E-RELATED | 226 | 317 | - | - | |
| Ahy4g0822 | 317 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 225 | - | - | |
| Ahy4g0822 | 317 | SUPERFAMILY | PP2C-like | 54 | 295 | IPR036457 | - | |
| Ahy4g0822 | 317 | Pfam | Protein phosphatase 2C | 68 | 225 | IPR001932 | - | |
| Ahy4g0822 | 317 | PANTHER | PROTEIN PHOSPHATASE 2C 42-RELATED | 226 | 317 | - | - | |
| Ahy4g0822 | 317 | PANTHER | PROTEIN PHOSPHATASE 2C 42-RELATED | 1 | 225 | - | - | |
| Ahy4g0822 | 317 | SMART | PP2C_4 | 32 | 292 | IPR001932 | - | |
| Ahy4g0822 | 317 | ProSitePatterns | PPM-type phosphatase domain signature. | 71 | 79 | IPR000222 | GO:0043169 | |
| Ahy4g0822 | 317 | ProSiteProfiles | PPM-type phosphatase domain profile. | 42 | 294 | IPR001932 | - | |
| Ahy4g0822 | 317 | CDD | PP2Cc | 46 | 294 | IPR001932 | - | |
| Ahy4g0822 | 317 | Gene3D | - | 226 | 302 | IPR036457 | - | |
| Ahy4g0822 | 317 | Gene3D | - | 37 | 225 | IPR036457 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy4g0822 | Ahy-Chr4 | 12873128 | 12877148 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy4g0822 | 1 | 314 | PP2C-type Phosphatase Gene Family | AT4G38520 | 51.733 | 6.20e-127 | 367 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy4g0822 | K01102 | - | gmx:100811922 | 527.709 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy14g0907 | 14 | 14628589 | 14632661 | Ahy4g0822 | 4 | 12873128 | 12877148 | hybridization | |
| Ahy11g2662 | 11 | 142875452 | 142879730 | Ahy4g0822 | 4 | 12873128 | 12877148 | PCT | |
| Ahy1g2274 | 1 | 100695953 | 100700201 | Ahy4g0822 | 4 | 12873128 | 12877148 | PCT | |
| Ahy4g0822 | 4 | 12873128 | 12877148 | Ahy11g2662 | 11 | 142875452 | 142879730 | PCT | |
| Ahy4g0822 | 4 | 12873128 | 12877148 | Ahy1g2274 | 1 | 100695953 | 100700201 | PCT |