Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0816 ATGGAAGAAAAAAATACACCACCACTTCTTCCACCTCTACCATCACCGCCACAAATTTTTTCACCGCCATCACCACCATTTTCATTGTCTATACCCACTACTACTATCAATGATCTCAGCTTTCTCAATGATGATACGTTTTTTGAAAAGCCACTTATTGATTTAGTAAAAGAAGGAGACTTTGGTCCTTCTTTGTATGAGTGGTTAGGCATCGCCCATGAGGATGCTCCACCAGTTAAAAGACCAGTAAAGCATCCTCTTTGTTCTTTTCCTCCGGCCGCAATTGTTCTAGAATCTTCTAAAACAGTTGAACAATCACAAAACTCATCCTTTTCCTTAATCGCATCCAATCTTGACGTCGCTGTTGGTAACAACAATAATTGCAATAGAGTTTCCGGGATTAAACGTCCAGCAAAATCTGTTGTCGGTGACGGTGGAAATCAAAGTCTGAGAAGTGATGATGAACCTGGTGATGAAAAAATTAATATTATAACTAGGCTGAAACTGAGCCCATCTACAATGACATCGATTGCAGCTACCATGAAGATAAATAGAAGGAGCGAAAATAATCTTCCAAAACTTGCTTTCTTGACGGAGAGTGAATCAGACAACCTTGAAGATGGTTATAGATGGCGCAAGTACGGTCGAAAAACCGTGAGAAACAGCCCTTATCCAAGGAACTACTATCGTTGCACAACAATTGGTTGCAATGTGAAGAAGAGAGTAGAGCGGTGGTTAGATGATCCCACCCATGTATTAACCACCTATGAGGGTCTACACCTTCATGCTTTGCCACCGATCCCCCCTACTCCTTTTAAGTCCTTCAGCCTCTACAAAAACTGTACCACTGGCCCCAAACCTGACGGAGGCAGCTGTAGCTGTCGATGTAAATGTGCAGTCACAGTTGCAGGTGCAGGTGCAGATGCAGGGGAACAAAATCGTGCTAATAACGCTATTACTAGTGTTCATCTTAGAACTGTCAGTGGTGGTAGCGGTGTTAATGACGGTGGCTCGCAGCGCATTGTGGCAGGTGAAAATGAATTTAATTATAACAAACACATGCAGAATGTAGAAAAAGCAATTACACCAATACTGTTACAGAACTTCAAGTTAATTGCTCCACAGACTTTCTTGAATAATGCTACTCCCATGACTGTTACTAATAATGGTCATTACCAATCATCACTGATGAGTAGTGTTCATCATGGTAACAATCATCGTCAAGATTGTTTTGGTGCTGGATCTTCAAATGGTGGTGCCGAGGATTCGTTTAGGAAGAAGAGCACTGGTACCGGGCTGCTTGAAGATATTGTTAATTTCTCATGA 1326 0.4178 MEEKNTPPLLPPLPSPPQIFSPPSPPFSLSIPTTTINDLSFLNDDTFFEKPLIDLVKEGDFGPSLYEWLGIAHEDAPPVKRPVKHPLCSFPPAAIVLESSKTVEQSQNSSFSLIASNLDVAVGNNNNCNRVSGIKRPAKSVVGDGGNQSLRSDDEPGDEKINIITRLKLSPSTMTSIAATMKINRRSENNLPKLAFLTESESDNLEDGYRWRKYGRKTVRNSPYPRNYYRCTTIGCNVKKRVERWLDDPTHVLTTYEGLHLHALPPIPPTPFKSFSLYKNCTTGPKPDGGSCSCRCKCAVTVAGAGADAGEQNRANNAITSVHLRTVSGGSGVNDGGSQRIVAGENEFNYNKHMQNVEKAITPILLQNFKLIAPQTFLNNATPMTVTNNGHYQSSLMSSVHHGNNHRQDCFGAGSSNGGAEDSFRKKSTGTGLLEDIVNFS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0816 441 MobiDBLite consensus disorder prediction 1 24 - -
Ahy4g0816 441 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 147 275 - -
Ahy4g0816 441 ProSiteProfiles WRKY domain profile. 200 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g0816 441 SMART WRKY_cls 205 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g0816 441 Gene3D WRKY domain 191 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g0816 441 SUPERFAMILY WRKY DNA-binding domain 198 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g0816 441 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 147 275 IPR044810 GO:0003700
Ahy4g0816 441 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g0816 441 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0816 Ahy-Chr4 12660128 12662072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0816 193 268 WRKY Transcription Factor Family AT5G49520 69.737 1.07e-32 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy4g0816 WRKY 1.10E-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0816 - - adu:107483375 842.417