Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0761 ATGCATCCAGATACTTACCTAAATAAGGTTCTCGTTGGGAGCGAGCAAGGTCCTATGCAGCTTTGGAACATTAGCACAAAGAAAAATATATTTGAGTTTAAGGGATGGGATTCACCGATCACCTGTTGTGTTTCCTCCCCTGCTCTAGATGTCGTTGCAGTTGGGTGTGCAGATGGAAGCATTCATGTTCATAACATTCGTTATGATAAAGAATTGGTTACATTTACACATTCTACACGAGGTTTTGTCACTGCCTTATCTTTCTGCACTGATGGAAAACCCCTTCTAGCCTCTGGAGGTTCATCAGGTGTCATAAGCGTATGGAATCTGGAAAAGAAAAGGCTTCAGTCAGTTGTAAGAGAGGCTCATGATAGTGTGATCACATCACTACATTTTTTTGCAAATGAGCCAGTGCTTATGAGTTCTTCAGCAGATAATTCTATTAAGAATAATCTTCATGAACTCTGGACCCTTCTCAATTTTCTTCTGCCTGAAATTTTTAGCTCTGCTGAAACTTTTGATGAATGGTTCCAAATATCAGGTAAAATGGTTCTATTGGATAAGTTACTTCCTAAATTAAAAGAGCGTGATTCCGGGGTCCTGATATTTTTACAGCAAGACCATGGAGTAAGTGAGCAAGAACCAGGCATTAGTAGATGCTATTGGAGAACCAATAGTTAA 681 0.395 MHPDTYLNKVLVGSEQGPMQLWNISTKKNIFEFKGWDSPITCCVSSPALDVVAVGCADGSIHVHNIRYDKELVTFTHSTRGFVTALSFCTDGKPLLASGGSSGVISVWNLEKKRLQSVVREAHDSVITSLHFFANEPVLMSSSADNSIKNNLHELWTLLNFLLPEIFSSAETFDEWFQISGKMVLLDKLLPKLKERDSGVLIFLQQDHGVSEQEPGISRCYWRTNS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0761 226 Pfam SNF2-related domain 148 180 IPR000330 GO:0005524|GO:0140658
Ahy4g0761 226 Gene3D - 151 188 IPR038718 -
Ahy4g0761 226 SMART WD40_4 112 152 IPR001680 GO:0005515
Ahy4g0761 226 SMART WD40_4 26 65 IPR001680 GO:0005515
Ahy4g0761 226 SMART WD40_4 69 109 IPR001680 GO:0005515
Ahy4g0761 226 SUPERFAMILY WD40 repeat-like 3 149 IPR036322 GO:0005515
Ahy4g0761 226 Gene3D - 1 150 IPR015943 GO:0005515
Ahy4g0761 226 Pfam Anaphase-promoting complex subunit 4 WD40 domain 46 133 IPR024977 -
Ahy4g0761 226 PANTHER WD REPEAT-CONTAINING PROTEIN 36 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0761 Ahy-Chr4 11232068 11236569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0761 10 163 Miscellaneous Gene Families AT5G08390 29.870 5.03e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ahy4g0761 ANAPC4_WD40 3.00E-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0761 K14554 - ahf:112796269 464.151