Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0725 ATGAAGAAAGTCATAGCAGCCAGAAGCCGAAAACGTAAACAAGATCGCTCTCGCGCACAAGAAGAAGAAGTTTCTGATGATGAACATGTAACAGTCAAAGCCTCAGGTAAGAAAGGTTCTTATGCACAAGATAAGTCATTCAGTTTCTTCCTTTCAGACCCAGACGTCCTTGATTGCCCCATTTGCTTTAATCCTTTCACCACTCCAGTCTATCAGTGTGAAAATGGTCATGTTGCTTGCTCTGTTTGCTGCTCGCGCATTCTTGAGAAAAAGTGTGCCTCGTGCTCCTTGCCAATAGGTTCCATTCGTAGCAGAGCCTTGGAGAAAGTTCTGGAATCTATTCAAGTTCCATGCACTAATGCCGAATACGGTTGCACGGAAACACTGCGTTACAGTGACAAGTCTGGCCATGAATCCCAATGCAACTTTGTCCCATGCTCTTGTCCACACTCAGATTGTGACTTCGTTTCATCATTCTCGGATCTACCCGCCCACTATAGAACTGAGCATGGTTCCTCTGCCAGCGCCGGAGTGAGGTTTTTGTACGATAAGCCTTTCAAGGTCACACTGGATTCTGATGATGACGTCACTATACTTCAAGAAGTGAATGGTGGAAAGTTGTTCATAGTCCAGAATTTTGTGGCGGGTCTTGGAAATGCTGTCAGTGTTTTCTGCATTCAGCCAGAGTTATTGCCTAACTATCGGTGCCAAATTTCGGCCAAGTCAAATGGATGCAGTCTAGTGATGAATTCTTTTACAAAAAACACTCAAAACTCTGCTATGGCTACTATTCTTTCATCAAGGTTTCTGGTCATTCCAACTGATTATTTTGGTACCGGTCAACCTCGCAATTTAGAAATTAGCATATTTAGGTCATATGAATAG 885 0.4339 MKKVIAARSRKRKQDRSRAQEEEVSDDEHVTVKASGKKGSYAQDKSFSFFLSDPDVLDCPICFNPFTTPVYQCENGHVACSVCCSRILEKKCASCSLPIGSIRSRALEKVLESIQVPCTNAEYGCTETLRYSDKSGHESQCNFVPCSCPHSDCDFVSSFSDLPAHYRTEHGSSASAGVRFLYDKPFKVTLDSDDDVTILQEVNGGKLFIVQNFVAGLGNAVSVFCIQPELLPNYRCQISAKSNGCSLVMNSFTKNTQNSAMATILSSRFLVIPTDYFGTGQPRNLEISIFRSYE* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0725 294 MobiDBLite consensus disorder prediction 1 30 - -
Ahy4g0725 294 Pfam Seven in absentia protein family 102 274 IPR018121 GO:0005737|GO:0006511|GO:0007275
Ahy4g0725 294 MobiDBLite consensus disorder prediction 14 30 - -
Ahy4g0725 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 165 IPR013083 -
Ahy4g0725 294 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 10 290 IPR044286 -
Ahy4g0725 294 SUPERFAMILY TRAF domain-like 113 278 - -
Ahy4g0725 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 114 IPR013083 -
Ahy4g0725 294 ProSiteProfiles Zinc finger SIAH-type profile. 113 171 IPR013010 GO:0008270
Ahy4g0725 294 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 10 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0725 Ahy-Chr4 10515828 10517458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0725 55 180 C3H Transcription Factor Family AT2G41980 37.500 3.42e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0725 K04506 - gmx:100778869 232.646