Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0724 ATGAAGAAAGTCATAGCAGCCAGAAGCCGAAAGCGTAAACAAGATCGCTCTTGCGCAAAAGAAGAACAAGTTCCTGATGATGACGAACCTGTATCAGTCAAAGCCTCAGGTAAGAAAGGTTCTTCTGCACAAGATAAGTCCTTCAGTTTTTTCCTTTCAGACCCAGACGTCCTTGATTGCCCCATTTGCTTTAATCCTCTCACCACTCCAGTCTATCAGTGTGAAAACGGTCATGTTGCTTGCTCTGCTTGCTGCTCGCGCATTCTTGAGAAAAAGTGTGCCTCCTGCTTCTTGTCAATAGGTTCCATTCGTAGCAGAGCCTTGGAGAAAGTTCTGGAATCTATTAAAGTTGCATGCGCTAATGCCGAATACGGTTGCACGGAAACACTTCGTTACAGTGACAAATCTGGCCATGAGTCCCAATGCAACTTTGTCCCATGCTCTTGTCCACACTCAGATTGTAACTTCGTTTCATCATTCTCGGATCTACCCGCCCACTATAGAACTGAGCATGGTTCCTCTGCTAGCGCCGGAGTGAGGTTTTCGTACGGTAAGCCCTTCAAGGTCACACTGGATTCTGATGATGACGTCACTATACTTCAAGAAGTGAATGGTGAAAAGTTGTTCATAGTCCAGAATTTTGTGGCGGGTCTTGGAAATGCTGTCAGTGTTTTCTGCATTCAGCCAGAGTTATTGCCTAACTATCGGTGCCAAATTTCAGCCAAGTCAAATGGATGCAGTCTGGAGATGAATTCTTTTACCAAAAACATTCAAAACTCTGCTATGGCCAGATTGGCAACTATTCTTTCATCAAGGTTTCTGGTCATTCCAACTGATTATTTTGGTGCCGGTCAACCTCGCAATTTTGAAATTTGCATATTTAGGTCATATGAGTAG 897 0.4404 MKKVIAARSRKRKQDRSCAKEEQVPDDDEPVSVKASGKKGSSAQDKSFSFFLSDPDVLDCPICFNPLTTPVYQCENGHVACSACCSRILEKKCASCFLSIGSIRSRALEKVLESIKVACANAEYGCTETLRYSDKSGHESQCNFVPCSCPHSDCNFVSSFSDLPAHYRTEHGSSASAGVRFSYGKPFKVTLDSDDDVTILQEVNGEKLFIVQNFVAGLGNAVSVFCIQPELLPNYRCQISAKSNGCSLEMNSFTKNIQNSAMARLATILSSRFLVIPTDYFGAGQPRNFEICIFRSYE* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0724 298 MobiDBLite consensus disorder prediction 11 34 - -
Ahy4g0724 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 166 IPR013083 -
Ahy4g0724 298 ProSiteProfiles Zinc finger SIAH-type profile. 114 172 IPR013010 GO:0008270
Ahy4g0724 298 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 16 295 IPR044286 -
Ahy4g0724 298 SUPERFAMILY TRAF domain-like 114 282 - -
Ahy4g0724 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 116 IPR013083 -
Ahy4g0724 298 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 16 295 - -
Ahy4g0724 298 Pfam Seven in absentia protein family 103 215 IPR018121 GO:0005737|GO:0006511|GO:0007275
Ahy4g0724 298 MobiDBLite consensus disorder prediction 1 45 - -
Ahy4g0724 298 SUPERFAMILY RING/U-box 55 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0724 Ahy-Chr4 10511028 10514654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0724 56 183 C3H Transcription Factor Family AT2G41980 36.154 6.06e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0724 K04506 - gmx:100778869 226.868