Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0700 ATGATTCTTCAATCTGCATTTCACTACTATTCTCATATCATTTTGATGATAATATCCATATATCCATTGTTGTTGGCATGTGCAAAAGATCTTACCATAGCAAAACCTGGTTGTGTTTCCACATGTGGGAACGTTGACATCGCTTACCCTTTTGGTATGAACGACTCCAATTGCTATGCTCACAAATTTTTCGAGATAGAGTGCAAAAATCACAAGCCTTACCTTGCAACATTCAATCTTGAGGTCACACAAATTTATGTAAACGTTAGCACAGTGGAGATCAAGAACCCAATCTACTATAGCTGCCAAAGCAAAAATGCTTTCATAAACCTAACAGGAAGCCCTTACGTGTATTCCCAAGAATACGACAAATTCATGGCCATTGGTTGCAACAAACTAGGGTTCTTGCGTTCCAACGGTTCAAAGGTTGGCGGTTGCGTGTCCATCTGCGACGGCGATGAAGCGGTTGGAAAGGTTGAATTCGGAAACGACGGTTGCCATGGGAGATACTGCTGTGAGACTTCACTGCCTATGCATGTTTGGGAGTACAACGCAACAATAAGGGATATTATTATTGGAGATGGAAGTGAGAGCAACACGTGTAGCTATGCCATGATTGTGAGTGATGCTTGGCTTCACAGTTATGGTTTGGGGATTCAGAAACTTAGTAACGTAGAGAACATGATTGATGTTCCTGCTGTTCTTGAGTGGGAGATTCGGTATGATATGGGGATCAATTCAACACTCTCTCCTTCTCGTGCTTGTTGTGACGGTTCGAGTCTTACGTCTCCAAGCAACACTTCCTCTGGTTTTAGGTGTCGCTGCTTGGATGGTTACGATGGCAATCCCTACATTCGAGGGGGTTGCAACGCTGTGGCATCCGGTAAAGAAAGTGGATCCAAATGGGCTATAATAGTGCCATTATCATCAGGATTAAATATGGTTCAAAAATTAATCTGGTATTTCATTGAGATGTATGCTGGAGTTTCATCAAGTCTTGGGTCAGTCATTTTACTCCTTGGTGGATGGTTGTTGTACAAACTTATAAGGAAGAGAATAATAAAGAAACGCAAGGAAAAGTTCTTCAAGAAAAATGGCGGTTTGTTGTTAAAACAAAAGTTGTCTTCAGGCGAAGAAAATGTTGACAAAGTTGTTCTCTTCACCTTAAAAGAATTAGAAAATGCCACTGACAACTTCAATCTAAACAGAATTCTTGGAAAAGGAGGCCAAGGTACCGTTTACAAGGGAATGCTAGTAGATGGCAAAATCGTTGCAGTTAAAAAGTTCAAAGTCCAAGGAAACACTGCAGAATTCATCAATGAATTCGTTGTTCTTAATCAAATTAACCATAGAAATGTGGTTAAGTTATTAGGGTGTTGTTTGGAGGATGAAGTTCCTTTGCTCGTTTATGAATTTATTCCCAATGGTAACCTTTATGAACATCTTCATGAACAAAATGAAGATTTACCAATGACATGGGACATGAGATTGAGAATTGCCAGTGAGATTGCAGGAGCACTTTTTTACTTACACTCCATTGCTTCTCAACCCATTTATCATAGAGATATCAAATCAACAAACATACTATTGGATGAAAAATACAGGGCAAAAGTAGCAGATTTTGGAACCTCTAGAATAGTTTCTGCTGAAGCTACTCATCTCACTACGGTAGTTCAAGGAACTTTTGGTTATTTAGATCCTGAATACTTTCAAACTAGTCAGTTTACTGATAAGAGCGATGTTTATAGTTTTGGAGTAGTGCTTGTCGAACTTTTAACCGGACAGAAGGCAATATCGTCGATAAGATCGGACGAAGTGAGGGGTCTAGCTTCGTTTTTTGTTGTGTGTATGGAAGAGAATCAGGTATTTGACATTGTTGACAAAAGAGTGTTGAAGGAGGGAGAGAAAGAACATATAATTGCAGTGGCTAATCTTGCATATAGATGTTTAGAGTTGAATGGGAGAAAAAGGCCTACTATGAAACAAGTTACCTTGGAATTAGAAGGGATTAGAAGATTGGATTATTGGAAGGGTGGTTCGGCACAAGAAAACTTTGAAGAAATTGAGCTTGATAGAAATGAAGACAATCAACTATGGGATGGATATTCATATTCTAATGTGTCAGAAACATTGCACACTACTACAAGTAGCAGCAGGGAACTCTCCGAGGTTATGCCTATTCTTAAAATCAAATAA 2196 0.3916 MILQSAFHYYSHIILMIISIYPLLLACAKDLTIAKPGCVSTCGNVDIAYPFGMNDSNCYAHKFFEIECKNHKPYLATFNLEVTQIYVNVSTVEIKNPIYYSCQSKNAFINLTGSPYVYSQEYDKFMAIGCNKLGFLRSNGSKVGGCVSICDGDEAVGKVEFGNDGCHGRYCCETSLPMHVWEYNATIRDIIIGDGSESNTCSYAMIVSDAWLHSYGLGIQKLSNVENMIDVPAVLEWEIRYDMGINSTLSPSRACCDGSSLTSPSNTSSGFRCRCLDGYDGNPYIRGGCNAVASGKESGSKWAIIVPLSSGLNMVQKLIWYFIEMYAGVSSSLGSVILLLGGWLLYKLIRKRIIKKRKEKFFKKNGGLLLKQKLSSGEENVDKVVLFTLKELENATDNFNLNRILGKGGQGTVYKGMLVDGKIVAVKKFKVQGNTAEFINEFVVLNQINHRNVVKLLGCCLEDEVPLLVYEFIPNGNLYEHLHEQNEDLPMTWDMRLRIASEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRIVSAEATHLTTVVQGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELLTGQKAISSIRSDEVRGLASFFVVCMEENQVFDIVDKRVLKEGEKEHIIAVANLAYRCLELNGRKRPTMKQVTLELEGIRRLDYWKGGSAQENFEEIELDRNEDNQLWDGYSYSNVSETLHTTTSSSRELSEVMPILKIK* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0700 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Ahy4g0700 731 Pfam Wall-associated receptor kinase galacturonan-binding 38 95 IPR025287 GO:0030247
Ahy4g0700 731 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 19 725 - -
Ahy4g0700 731 SUPERFAMILY Protein kinase-like (PK-like) 380 667 IPR011009 -
Ahy4g0700 731 Pfam Protein kinase domain 400 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0700 731 ProSiteProfiles Protein kinase domain profile. 399 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0700 731 CDD STKc_IRAK 405 670 - -
Ahy4g0700 731 Gene3D Phosphorylase Kinase; domain 1 371 472 - -
Ahy4g0700 731 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 725 IPR045274 GO:0007166
Ahy4g0700 731 Gene3D Transferase(Phosphotransferase) domain 1 473 691 - -
Ahy4g0700 731 SMART serkin_6 399 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0700 Ahy-Chr4 10132074 10138979 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0700 30 726 Receptor kinase-like Gene Family AT1G79680 42.248 2.90e-180 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy4g0700 Pkinase 8.60E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0700 - - mtr:MTR_2g031530 803.127