Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0680 ATGAGTTCTTCAGTGACAGGAGCTGCTGGATCTGGTGATGATGGAAGAAGTAGTAACAACAAAGGAAAAAGACCTGCCTACAAACGCCTTACTTCTGCTCAAACAGCTAAACTTGAAAAGTACATTATTGATTGTCCTCATCCTGATGAAGCTCAACGAAGGCAACTTGCTGAGGAGGTTGGGATAGAGCCAAAACAAGTCAAGTTTTGGTTTCAGAATAAGAGAACTCAAATAAAGAATCAACATGAGCGAGCAGATAACAATGCTCTTCGGGCTGAGAATGAAAGGATACAAAACGAGAATCTCCTAATGAAAGAGGCACTTAATAATATACTTTGCCCTTCTTGTGGGGGCCCACCTGCCGCTGGTGAAGACCATGAACACTTCATGCAGAAAATGCTTCTTGAAAATGCCCACCTTAAGGAAGAGGCAAGCCTAAACTCCTTCAACACATCCTCTTTTCAACATGTTTCGCATGGGAAAATATCAAACATTCTTTCAAGGTACTTGGAGAAAGAGGTGCTACACCCTGAAGATATAGAGCAGCTAAACGCAATTCCGAACAACATAGACATTGCGGGGTCATCATCAACAACACCACTGTATGATTTCTCAGTTGCAAATGGAACCTTGTTGAACCAACAACAAGGGGTTAGCATCAATGATGTTGTTGCAGGCCCTTCTTCTTCACTACTTCATCATCAGAACTATGTTCCACCACCAATTGTTGCTGATAATAATAATAATGGGGAACAAGGTGTGGCAGTAATGGAGGTTGCATTGGCCTCCGAGGTTGCGGCTACCGCCCTGGATGAACTGCTTAGGCTTATTCGCCTCAATGAACCGTTCTGGGTTGGTTCTGCTTTTGATGGGAAGCTTGTGCTTCACGGTGAAAGCTACGAAAAGATGTTCCCTAGGGTTTATCAATTCAACGATGGAAACTCTCGTGTTGAATCATCAAAGGAATCAGGGATTGTCAACATAAGTGGGATTCAACTGGTTGATTTGTTTCTTGATTCGGAAAAATGGGCGAATGCTTTTCCAACAATAGTTACAAAAGCGCAGACACTTGAAGTCTTTGAAATTGGATTGCCAGAAAGTCGAAGCGGAGCCTTACAATTGATGTATGAAGAGATGCACGGGTTTTCACCATTGGTGGCATCTCGTGAATTCCAATTCCTCCGGCACTGCCATCAACTGGAGCCTGGATCGTGGATCATAACAGATGTGTCTTTCGATTCGCTTCGAAACTACCCCTTTCGCCTTCCTCGCTCTCGCTCTTGGAGACGTCCCTCTGGATGCTTGATCCAGGAACTCCCCAACTCCACTTCTTGCATGGTTACTTGGATCGAACACGTGGAAGTGGATGATAAGATTCAGACTCACCGGCTTTACAGAGATCTTGTTAGCACCAATGCTGCATATGGAGCACAGAGATGGATTATGGAACTTCAAAGAATGTGCCTCAGATCTATGAGCTATGCTCTTGAAAACATACCTGATCATGAATATGGTGGAGTGATAAATACAAATGAAGGAAGGAGGAGTGTGATGAGGCTAGGTCAGAGGCTGGTGAGGCTATTTAGTGAGAATTTGAACATGAGTGGAAAGGTGGAGTTTCCGCAGTTGAGTGTGGAGTACAACAGTGGGGTGAGGATCTCAGCTCGAAGATGCACAGAGAAAGGGCAGCCAAATGGGACCATTGTGATTGCTGCAACGTCTCTTTGGCTGCCTCTCCATTACCACACAGTGTTTGAATTCTTGACTGATATCAACAAACGCTCTCAGTGGGATGTTCTTTTCTGCACAACTCCAGTCCACTACATTGCACACATCTCAAATGGAACTCATCCTGCCAACAATACATCAATTATCCAGCCATTCATGTCAAGCGAGAACAATGCCGTTATAATTCAAGAAAGCTTCATAGACCCAGTGGGATCATCTTACATAGTGTATGCTCCAGCTGACGTGGAAGCCATCCACGTCGCCATTAGCGGCGAGGACTCTTCCACCATCCCTATCCTTCCCTCAGGATTTGTTGTGTGTGGAGATGGCAGAGCATCAATGATGAGCAACAGCACCATTATTGCACCATCGGTTCTTGGTGGAGTTGGAAGCTATGGCTATCAGCATAGATCAGAAGGAGGGTCACTGTTGACGGTGGCATTCCAAATTCTGGTTAATACCATCACTTGTGGACCCAACCTAGTGAATATGGAATCTGTGGATTCTATTAACACCCTTTTGACTTCAACCGTCCAGAAGATCAAGGACGCTTTGAACTGCAATGCCTTGCACTGA 2304 0.4479 MSSSVTGAAGSGDDGRSSNNKGKRPAYKRLTSAQTAKLEKYIIDCPHPDEAQRRQLAEEVGIEPKQVKFWFQNKRTQIKNQHERADNNALRAENERIQNENLLMKEALNNILCPSCGGPPAAGEDHEHFMQKMLLENAHLKEEASLNSFNTSSFQHVSHGKISNILSRYLEKEVLHPEDIEQLNAIPNNIDIAGSSSTTPLYDFSVANGTLLNQQQGVSINDVVAGPSSSLLHHQNYVPPPIVADNNNNGEQGVAVMEVALASEVAATALDELLRLIRLNEPFWVGSAFDGKLVLHGESYEKMFPRVYQFNDGNSRVESSKESGIVNISGIQLVDLFLDSEKWANAFPTIVTKAQTLEVFEIGLPESRSGALQLMYEEMHGFSPLVASREFQFLRHCHQLEPGSWIITDVSFDSLRNYPFRLPRSRSWRRPSGCLIQELPNSTSCMVTWIEHVEVDDKIQTHRLYRDLVSTNAAYGAQRWIMELQRMCLRSMSYALENIPDHEYGGVINTNEGRRSVMRLGQRLVRLFSENLNMSGKVEFPQLSVEYNSGVRISARRCTEKGQPNGTIVIAATSLWLPLHYHTVFEFLTDINKRSQWDVLFCTTPVHYIAHISNGTHPANNTSIIQPFMSSENNAVIIQESFIDPVGSSYIVYAPADVEAIHVAISGEDSSTIPILPSGFVVCGDGRASMMSNSTIIAPSVLGGVGSYGYQHRSEGGSLLTVAFQILVNTITCGPNLVNMESVDSINTLLTSTVQKIKDALNCNALH* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0680 767 Gene3D - 298 478 IPR023393 -
Ahy4g0680 767 SUPERFAMILY Bet v1-like 548 758 - -
Ahy4g0680 767 MobiDBLite consensus disorder prediction 1 16 - -
Ahy4g0680 767 Gene3D - 11 98 - -
Ahy4g0680 767 Pfam START domain 264 489 IPR002913 GO:0008289
Ahy4g0680 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 19 763 - -
Ahy4g0680 767 SUPERFAMILY Homeodomain-like 17 86 IPR009057 -
Ahy4g0680 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 763 IPR042160 -
Ahy4g0680 767 SMART HOX_1 23 85 IPR001356 GO:0003677
Ahy4g0680 767 ProSiteProfiles START domain profile. 255 493 IPR002913 GO:0008289
Ahy4g0680 767 Coils Coil 75 110 - -
Ahy4g0680 767 CDD homeodomain 21 82 IPR001356 GO:0003677
Ahy4g0680 767 ProSitePatterns 'Homeobox' domain signature. 56 79 IPR017970 GO:0000981|GO:0006355
Ahy4g0680 767 SMART START_1 264 490 IPR002913 GO:0008289
Ahy4g0680 767 Pfam Homeodomain 27 79 IPR001356 GO:0003677
Ahy4g0680 767 SUPERFAMILY Bet v1-like 262 489 - -
Ahy4g0680 767 CDD START_ArGLABRA2_like 260 488 - -
Ahy4g0680 767 ProSiteProfiles 'Homeobox' domain profile. 21 81 IPR001356 GO:0003677
Ahy4g0680 767 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0680 Ahy-Chr4 9775192 9780526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0680 23 762 Homeobox Transcription Factor Family AT1G73360 40.241 2.20e-179 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy4g0680 START 1.00E-31 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0680 K09338 - gmx:100795075 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0756 14 11155613 11161220 Ahy4g0680 4 9775192 9780526 hybridization