Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0618 ATGGAGGCTGAAGAAGGCTGGCAGCGGCAAGGAAGCAGAAGACGTAGAAGACTGGGAGGGACAAAAGTCGAAGTAAAAGATAAATGGGTGGGTGATCAGAAGGACAAATGGGAGAACATAAAGAGGAACTCGCATTCGGTGTTCATCGATAATTTACCATGGGAGATATCTAAAGGGACTCTTTTCAAGGCATTCGGATGGGTCGGGGCAGTGACTGATATATACATCTCGAGGAAAAAGAGAAGAGGCATTGCATCCCCTTTTGCATTTGTAAGGTTTGATGCTAAAGGTAGAGCAGAAAGAGCGGTTCAGAAGCTCAACGGGGTGTGCATCGGAAGCAAAAGGATGACAGTGACTCATGCATGCTTCACCAGAGGGCTAAGAAGGCAAAAGGAGCAACAAGGGGTATGGAGGAGCAAGAAGAAAACAGACATAGATAATGTGAGAAGATGCAAGGAGATAGCACATAACCAAGAATCACTGAGTGTGGCTATTAAAGAGAAGAGTGATGAAGAGCAAATTGAAGTGAAGATATCGAGCACACAAGCTGAGATGCTGAAGAGAAGTATTGTAGGGGAGAACTCCAAACCGATAGTTTTCTCCAAGATGATGAAAAGTATTAGGGAGAAGTGGGAAGGTCCGGGAAGGGTGGAGTGCAGAGATGTAGGTCCCTTCAAGTGCTTGCTTACCTTTGAATCAAAGGAATATATGCAAGTGGCTTTGAAATCAGAGGCCTTGACTGGATTAGTGGATGAGTTGAAACCTCATAATGGGATGGTTTGGAATGCCACAAGGAGGATATGGTTGGAAGTTATAGGAGTCCCTATTTAA 831 0.4465 MEAEEGWQRQGSRRRRRLGGTKVEVKDKWVGDQKDKWENIKRNSHSVFIDNLPWEISKGTLFKAFGWVGAVTDIYISRKKRRGIASPFAFVRFDAKGRAERAVQKLNGVCIGSKRMTVTHACFTRGLRRQKEQQGVWRSKKKTDIDNVRRCKEIAHNQESLSVAIKEKSDEEQIEVKISSTQAEMLKRSIVGENSKPIVFSKMMKSIREKWEGPGRVECRDVGPFKCLLTFESKEYMQVALKSEALTGLVDELKPHNGMVWNATRRIWLEVIGVPI* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0618 276 Gene3D - 20 152 IPR012677 -
Ahy4g0618 276 SUPERFAMILY RNA-binding domain, RBD 37 122 IPR035979 GO:0003676
Ahy4g0618 276 SMART rrm1_1 46 119 IPR000504 GO:0003723
Ahy4g0618 276 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 123 IPR000504 GO:0003723
Ahy4g0618 276 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47 116 IPR000504 GO:0003723
Ahy4g0618 276 CDD RRM_SF 47 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0618 Ahy-Chr4 8433873 8434703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0618 41 108 Eukaryotic Initiation Factors Gene Family AT3G11400 33.824 4.09e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0618 K12891 - ahf:112794598 535.798