Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0578 ATGTCGTCTCACCAAACCACCACTGACTCCGAGCTCGTCTGCGTCACCGGTGCAAACGGCTTCATCGGTTCCTGGCTAGTCCACACCCTCCTCCACCACCACCCACGCTACACCGTCAACGCCACCGTCTTCCCCGGTTCCGATTACTCCCACCTCCTCACCCTCCACCCTGACGCCAATTCCCGCATCAAAATCTTCCCCGCCGACATCCTCGACGCCGCTGCCATATCCGCCGCAATCTCCGGCTGCTCCGGCGTCTTCCACGTCGCCTCCCCCTGCACTCTCGACGACCCCGCAGACCCGGAGAATTCCCTCCTCAGGCCTGCCGTTCAAGGAACCCTAAACGTCCTCGAGGCCGCGAAGCGAACAAACGCGCGGCGCGTTGTTCTCACGTCCTCAATATCCGCCATGGTTCCGAACCCTAATTGGCCTCCAAACAAACCTTTCGACGAGGATTCCTGGACGGACGTTGAATTCTGCAAGAAGAGGGGGAAGTGGTACCCAGTGTCGAAGACAGCGGCGGAGAAGGCGGCGTGGGAGTTCATGGAAAAGAACGGCGGCGCTGACGTGGTGGCAGTGCTTCCGTCGACGTGTCTTGGGGAACTGCTGCAGAAGGAGCTGAATGCAAGCTCGGCGGTCCTGCAGAGGCTGATGACGGGGTCGAGGGACACGCAGGAGCATTACTGGTTGGGTGCAGTGCACGTGAGGGACGTTGCTAGGGCTCAGGTTTTGATCTATGAGACTCCTTCTGCTGCTGCTAGATACTTGTGTACCAATGGTATCTACCAGTTCTCTAGCTTTGCAAAGATTCTCTCTGAGTTGTACCCTGATTTTCCTATCTACAGGTTCCCTGAAGAAACTCAACCTGGCTTGACACCATATAAAGATGCAGCAAAGAGACTAATAGATTTGGGTTTTGTGTTCACCCCAGTTGAAGATGCTGTGCGAGAAGCAGTGGAGAGCCTCATAGCTAAAGGTTTCTTGCAGAGAATACCCTCACAAAATTAG 1008 0.5585 MSSHQTTTDSELVCVTGANGFIGSWLVHTLLHHHPRYTVNATVFPGSDYSHLLTLHPDANSRIKIFPADILDAAAISAAISGCSGVFHVASPCTLDDPADPENSLLRPAVQGTLNVLEAAKRTNARRVVLTSSISAMVPNPNWPPNKPFDEDSWTDVEFCKKRGKWYPVSKTAAEKAAWEFMEKNGGADVVAVLPSTCLGELLQKELNASSAVLQRLMTGSRDTQEHYWLGAVHVRDVARAQVLIYETPSAAARYLCTNGIYQFSSFAKILSELYPDFPIYRFPEETQPGLTPYKDAAKRLIDLGFVFTPVEDAVREAVESLIAKGFLQRIPSQN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0578 335 CDD FR_SDR_e 13 306 - -
Ahy4g0578 335 Pfam NAD dependent epimerase/dehydratase family 13 251 IPR001509 -
Ahy4g0578 335 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 8 318 - -
Ahy4g0578 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 322 IPR036291 -
Ahy4g0578 335 Gene3D - 2 335 - -
Ahy4g0578 335 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0578 Ahy-Chr4 7627584 7629956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0578 11 328 Monolignol Biosynthesis Gene Families AT2G02400 65.204 8.15e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0578 - - vra:106775739 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0654 14 9113413 9115749 Ahy4g0578 4 7627584 7629956 hybridization