Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0556 ATGTATCATCAAAAGAGTGTCCCTAGTTCAAGTTTAATCGGAAGCAATTCATTGGTTCATGGTAGTAGCACAATGGATCCTGGCAATGGAGACAATCTTTCCAACAACCCTAATCTCGCCTCAAAGCAACGTTTACGGTGGACACATGAGCTACATGAGCGCTTTGTTGATGCTGTGGCACAACTTGGTGGACCAGATCGCGCTACACCGAAAGGTGTCCTTAGAGTTATGGGTGTGCAAGGCTTAACAATCTACCATGTGAAAAGTCATTTACAGAAATATCGTCTAGCAAAGTACCTACCTGATTCCTCGTCTGATGAAGGAAAGAAAACTGACAAGAAAGAAGCAGGGGATATGCTTTCCAATCTAGATGGTTCACCTGGGATGCAAATTACTGAAGCATTAAAGCTTCAAATGGAGGTGCAGAAACGCCTACATGAACAATTGGAGGTTCAGAGGCAGCTACAATTGAGGATAGAAGCCCAGGGTAAATACTTGAAAAAGATAATTGAAGAGCAACAACGGCTCAGTGGGGTTCTTTCAGATGTACCCGGCTCTGGGATTGCTGGGCAAGTTCCAGAAGATACCTGCCCAGATCCTGATAACAAGACTGATCCGGCAACTCCTGATCCGGAGAAAGCAGCCAAAGAACGTGCCCCAGCAAAGAGTCTTTCAAATGAATCTTTTTCGTCTCACCACGAACCGTTGACACCAGATTCTGGTTCCCCTGCTGACAGCCCCAAAGGGGAGAGATCAACCAAGAGGCAAAAAGTAAGTGTGGAGGCAACATTTTCCAAACCGGATATGGTGCTCCCGCATCAGATACTGGAGTCGAGCATGTCGTCGTACCAGCAATCAAGCACCGTTTTCCTTACACAAGATCAATTTGATCCATCATTGGGTATGTCTGCTAGAAATAGTGAGGAATTGGAGAAGGTTGGTAGTGGCAGTAACATTTGA 960 0.4552 MYHQKSVPSSSLIGSNSLVHGSSTMDPGNGDNLSNNPNLASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKTDKKEAGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSDVPGSGIAGQVPEDTCPDPDNKTDPATPDPEKAAKERAPAKSLSNESFSSHHEPLTPDSGSPADSPKGERSTKRQKVSVEATFSKPDMVLPHQILESSMSSYQQSSTVFLTQDQFDPSLGMSARNSEELEKVGSGSNI* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0556 319 SUPERFAMILY Homeodomain-like 41 96 IPR009057 -
Ahy4g0556 319 Gene3D - 41 100 - -
Ahy4g0556 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 310 - -
Ahy4g0556 319 MobiDBLite consensus disorder prediction 1 38 - -
Ahy4g0556 319 MobiDBLite consensus disorder prediction 223 237 - -
Ahy4g0556 319 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Ahy4g0556 319 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Ahy4g0556 319 MobiDBLite consensus disorder prediction 300 319 - -
Ahy4g0556 319 Pfam MYB-CC type transfactor, LHEQLE motif 129 175 IPR025756 -
Ahy4g0556 319 MobiDBLite consensus disorder prediction 181 267 - -
Ahy4g0556 319 MobiDBLite consensus disorder prediction 101 119 - -
Ahy4g0556 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 310 IPR044848 GO:0003700
Ahy4g0556 319 Coils Coil 132 152 - -
Ahy4g0556 319 MobiDBLite consensus disorder prediction 198 220 - -
Ahy4g0556 319 MobiDBLite consensus disorder prediction 101 127 - -
Ahy4g0556 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0556 Ahy-Chr4 7376782 7384377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0556 77 319 G2-like Transcription Factor Family AT2G01060 62.500 9.76e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy4g0556 Myb_DNA-binding 2.10E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0556 - - gmx:100786925 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0626 14 8819670 8824072 Ahy4g0556 4 7376782 7384377 hybridization