Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0555 ATGTATCCGAGGCTGATACACCCACATGAAGCAGGGCTTGTTGGACAAGAAGATGTTCAAGTTGGTGGCGCCTCCAATCTCACACACAAGGGAGACCCATGTCTTGTTCTCACTGCTGATCCAAAACCAAGACTTCGTTGGACTCAGGACCTCCATGAACGCTTTGTTGATGCTGTCACTCAGCTCGGAGGTGCTAGTAAAGCTACGCCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTGAAGAGTCATCTTCAGAAATATAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGATTGTCGGGTTCATACTTAGAAAGTCCTGGTACTGACAACTCTTCTCCAAAGTTGCCAACTTCCGATACCAATGAGGGTTTTGAAATCAAGGAAGCCTTAAGAGCACAAATGGAAGTGCAAAGTAAACTACATTTGCAAGTAGAGGCAGAGAAGCATTTGCAAATTCGCCAAGACGCAGAGCAAAGATACATGGTCATGCTTGAAAGAGCTTGTAAGATGCTAGCGGATCAATTCATTGGCGCTACCGTCATAGACACGGACAACCAAAAGTTTCAAGGAGTCGCGAGCAAGACCCCAAGAGGTCCCATGGTTGATCCTCTTGGTTTTTTCTCCATGCCATCTACTGAAGTGGCGGGAGTCAATGTCCCGGAAGAGGAACTACCTCATAGCCTCCCGCCACAGAGGGCTGACTGTTCGACTGAAAGTTGTCTAACCTCACATGAGACTACCGGGGGGTTGATTTTAGAAGGATCACCCGGTGAGGGGAAAAGGAGGCTGCTAGGCATGGACTCTATGGCAGCACCTTTGATCTGGACTGAAGCTAAGATGAGAACTCAAGCCATCAATGTAGCCCAAGGTAACCCTCATGGAATAACTAGGTACGCCGGCATGTAG 948 0.4747 MYPRLIHPHEAGLVGQEDVQVGGASNLTHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGLSGSYLESPGTDNSSPKLPTSDTNEGFEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAEQRYMVMLERACKMLADQFIGATVIDTDNQKFQGVASKTPRGPMVDPLGFFSMPSTEVAGVNVPEEELPHSLPPQRADCSTESCLTSHETTGGLILEGSPGEGKRRLLGMDSMAAPLIWTEAKMRTQAINVAQGNPHGITRYAGM* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0555 315 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Ahy4g0555 315 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Ahy4g0555 315 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Ahy4g0555 315 MobiDBLite consensus disorder prediction 99 133 - -
Ahy4g0555 315 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 313 - -
Ahy4g0555 315 Pfam MYB-CC type transfactor, LHEQLE motif 139 184 IPR025756 -
Ahy4g0555 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 313 IPR044848 GO:0003700
Ahy4g0555 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Ahy4g0555 315 Gene3D - 41 99 - -
Ahy4g0555 315 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0555 Ahy-Chr4 7369992 7373944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0555 31 257 G2-like Transcription Factor Family AT3G24120 46.639 9.89e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy4g0555 Myb_DNA-binding 5.40E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0555 - - gmx:100786397 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0625 14 8807633 8811747 Ahy4g0555 4 7369992 7373944 hybridization