Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0552 ATGGGGAGAAGAAACGGTAAAAGGTCACTGCATGGAACCCTCCGCCGCTGGCTGGAGTCGTGCATGTCCAGTCACTCCACTGTCGATGATATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAACGCACCAAGCACCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTTCCAAACACGCGACCAAAGTCTCTGCCAAGCGCAGCGGCCACAATGGCGACGAAGAAAGTGGTCGACGCGCGCTCCGAAAGAGACAGAAGAGAGTCGACGAAGGTGAAGAGAGGTTGCAGGGCGACAAAGAAACTCAGGGTTCTGCATCTTCCTCCTCTGCTTCAAGCTTGAGCGCGTCCGGGAGCAGCGGCAGTGAGGATGATGATGGCAGCACAGTGTCTGTTTCGACATCGGAGGACGCAAAATACCGGGAGAAGTACGAACCTGCTGTCGATTTGATGAAGACGATGCTGCGGAAAGCGTATACTCCTACGAAGGATGATAGTGCGAGGAAGATGAAAAACGTCGTGCAAGATAAGAACGTTGAAATGGAGGTCGCCAATAGTGACAAGGCTACTAATGAGATTTGTGCTAAGAATGGAGGCGGAGGCAAAGTGAAGGCGGCGTCGAATTTGAAGGGTTCCGTTTCAAATGGCGACCATGGTGGTGGCAGCTTTGTTAAGGTGAAGGCAGGACCTAGGTTAAGTGATTTGGGTGGGATGAATGATCTTCTGGAAAAGCTGGTGGAAGAAGTGATTGTTCCATGGTATTATCCTGAGCTTCCAAGAAAGCTATGTCGTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCCGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCCGTGTTCCCTTCTATCCGATATCAGCTACTGAGTTGGTTTCTGGAGTATCGGGTGCATCTGAAGAGAATATCAGAGAGCTTTTCGCTAAAGCATATAGGACTGCCCCATCAATTGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGACAATTTACAGCGAGAGATGGAGAAAAGAATTGTAACACAGTTACTTGCCAGCATGGATCAATCAAATAGGCATATGCAATCCGCTAATGGTTTGGACAGTTCTAATGTTCATCCCAGTTATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTCTTGACTCGGCCTTGAGAAGGCCTGGGCGGTTTGATCGGGAGTTTGTTCTTGGCATTCCTGATGAATCGTCGAGAGAACATATCCTCTCTTTGCTCACTCGCAATCTTCCACTTCAGGGTTCATTGGATCTAAAATACATAGCCAGGTCTACACCAGGATATGTCGGTGCTGATTTGGCAGCCTTGATTACGGGGGCGTGTAATTTGGCCTTGAAGAGAATTATTTCCAAAAGGAGAGGGGAACATGAGACAAGTTATCTTGGAGACTGGTGGGGCGAACCTTGGCCTCTTGAAGATATGGATAAGCTTGTCTACACAATGTCTGATTTCCAGGAAGCTTTGAAAATTGTACAACCTTCATTAAGAAGAGAGGGCTTCTCATCCATTCCTGATGAGAAATGGGAAGATGTTGGCGGCCTTGATTATTTAAGGAAGGAGTTTAAAAATAGAATAATAAGGCCGATAAAATATCCTGAGGTTCATCAGGCATCTAGGTTTGCAAATCAGACGGGAATTTTACTTTTTGGGCCCCCTGGTTGTGGTAAAACTCTTATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTTATATTAAGGGGCCTGAGCTCTTAAATAAATTTGTTGGAGAAAGTGAGAGAGAAATTCGACTAACGTTTAGTCGTGCAAGGGCATGTTCACCCTGTATATTATTTTTTGATGAGGTGGATGCTTTGTCAACCAAACGTGGTGCAGAAGGTGGATCAGGCATTGAACGAGTAGTGAATCAGTTACTAATTGAGCTAGACGGTGGGGGGCAACGCCAAAATGTTTTTGTCATTGGTGCAACAAATAGGCCTGATAGGATGGATGAGGCTCTCCTCCGTCCTGGTAGACTTGGTAAACAACTTTACGTTCCTCTGCCAAGCACTGACCAGCGGTTTTCAATATTGAAAGCTCTTACAAGGAAGGAGCCTGTTGATCCTACTGTGGATCTGGGAGCCATAGCTGAAGCGTGTGAAAATTTTAGTGGCGCAGACCTTGCTGAATTGGTGGATGAAGCAACTCGTGCTGCTCTTGATGAGAAATATACCGCAGTTGAAGAAGCTTTGACCTCAGTTGAAGCCTCTAGTGATACTTATACTTGCAAGCCAAGACATTTTGATATAGCACTTAGTAAGGTCTTTCCCTCTGTGTCTCCCGCGGAAGACTTTTTTATAGATGTCTCAACTATGAGTTTGCAATTCATTGTAATTTCTTTCGTTTGA 2448 0.462 MGRRNGKRSLHGTLRRWLESCMSSHSTVDDIVNHLRSTYPDYQRTKHQALTRLVQQVLEPRSKHATKVSAKRSGHNGDEESGRRALRKRQKRVDEGEERLQGDKETQGSASSSSASSLSASGSSGSEDDDGSTVSVSTSEDAKYREKYEPAVDLMKTMLRKAYTPTKDDSARKMKNVVQDKNVEMEVANSDKATNEICAKNGGGGKVKAASNLKGSVSNGDHGGGSFVKVKAGPRLSDLGGMNDLLEKLVEEVIVPWYYPELPRKLCRTPTTGILLHGPPGCGKTTLAHAIANETRVPFYPISATELVSGVSGASEENIRELFAKAYRTAPSIVFIDEIDSIASKRDNLQREMEKRIVTQLLASMDQSNRHMQSANGLDSSNVHPSYVLVIGATNRPDALDSALRRPGRFDREFVLGIPDESSREHILSLLTRNLPLQGSLDLKYIARSTPGYVGADLAALITGACNLALKRIISKRRGEHETSYLGDWWGEPWPLEDMDKLVYTMSDFQEALKIVQPSLRREGFSSIPDEKWEDVGGLDYLRKEFKNRIIRPIKYPEVHQASRFANQTGILLFGPPGCGKTLIAKAVANEAGANFIYIKGPELLNKFVGESEREIRLTFSRARACSPCILFFDEVDALSTKRGAEGGSGIERVVNQLLIELDGGGQRQNVFVIGATNRPDRMDEALLRPGRLGKQLYVPLPSTDQRFSILKALTRKEPVDPTVDLGAIAEACENFSGADLAELVDEATRAALDEKYTAVEEALTSVEASSDTYTCKPRHFDIALSKVFPSVSPAEDFFIDVSTMSLQFIVISFV* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0552 815 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 82 795 - -
Ahy4g0552 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 529 797 IPR027417 -
Ahy4g0552 815 MobiDBLite consensus disorder prediction 105 139 - -
Ahy4g0552 815 Gene3D - 226 417 IPR027417 -
Ahy4g0552 815 ProSitePatterns AAA-protein family signature. 388 406 IPR003960 GO:0005524|GO:0016887
Ahy4g0552 815 Gene3D - 529 795 IPR027417 -
Ahy4g0552 815 MobiDBLite consensus disorder prediction 71 104 - -
Ahy4g0552 815 CDD AAA 558 701 - -
Ahy4g0552 815 MobiDBLite consensus disorder prediction 57 143 - -
Ahy4g0552 815 ProSitePatterns AAA-protein family signature. 671 689 IPR003960 GO:0005524|GO:0016887
Ahy4g0552 815 Pfam AAA+ lid domain 441 475 IPR041569 -
Ahy4g0552 815 Pfam AAA+ lid domain 724 762 IPR041569 -
Ahy4g0552 815 PANTHER AAA-FAMILY ATPASE 82 795 - -
Ahy4g0552 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 524 IPR027417 -
Ahy4g0552 815 CDD AAA 266 417 - -
Ahy4g0552 815 Gene3D - 702 786 - -
Ahy4g0552 815 Pfam ATPase family associated with various cellular activities (AAA) 571 700 IPR003959 GO:0005524|GO:0016887
Ahy4g0552 815 Pfam ATPase family associated with various cellular activities (AAA) 274 416 IPR003959 GO:0005524|GO:0016887
Ahy4g0552 815 Gene3D - 419 523 - -
Ahy4g0552 815 SMART AAA_5 270 420 IPR003593 -
Ahy4g0552 815 SMART AAA_5 567 703 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0552 Ahy-Chr4 7314925 7322197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0552 508 791 Calmodulin-binding Proteins AT3G56690 43.448 3.38e-64 231