Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy4g0551 | ATGGGGAGAAGAAACGGTAAAAGGTCACTGCATGGAACCCTCCGCCGCTGGCTGGAGTCGTGCATGTCCAGTCACTCCACTGTCGATGATATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAACGCACCAAGCACCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTTCCAAACACGCGACCAAAGTCTCTGCCAAGCGCAGCGGCCACAATGGCGACGAAGAAAGTGGTCGACGCGCGCTCCGAAAGAGACAGAAGAGAGTCGACGAAGGTGAAGAGAGGTTGCAGGGCGACAAAGAAACTCAGGGTTCTGCATCTTCCTCCTCTGCTTCAAGCTTGAGCGCGTCCGGGAGCAGCGGCAGTGAGGATGATGATGGCAGCACAGTGTCTGTTTCGACATCGGAGGACGCAAAATACCGGGAGAAGTACGAACCTGCTGTCGATTTGATGAAGACGATGCTGCGGAAAGCGTATACTCCTACGAAGGATGATAGTGCGAGGAAGATGAAAAACGTCGTGCAAGATAAGAACGTTGAAATGGAGGTCGCCAATAGTGACAAGGCTACTAATGAGATTTGTGCTAAGAATGGAGGCGGAGGCAAAGTGAAGGCGGCGTCGAATTTGAAGGGTTCCGTTTCAAATGGCGACCATGGTGGTGGCAGCTTTGTTAAGGTGAAGGCAGGACCTAGGTTAAGTGATTTGGGTGGGATGAATGATCTTCTGGAAAAGCTGGTGGAAGAAGTGATTGTTCCATGGTATTATCCTGAGCTTCCAAGAAAGCTATGTCGTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCCGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCCGTGTTCCCTTCTATCCGATATCAGCTACTGAGTTGGTTTCTGGAGTATCGGGTGCATCTGAAGAGAATATCAGAGAGCTTTTCGCTAAAGCATATAGGACTGCCCCATCAATTGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGACAATTTACAGCGAGAGATGGAGAAAAGAATTGTAACACAGTTACTTGCCAGCATGGATCAATCAAATAGGCATATGCAATCCGCTAATGGTTTGGACAGTTCTAATGTTCATCCCAGTTATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTCTTGACTCGGCCTTGAGAAGGCCTGGGCGGTTTGATCGGGAGTTTGTTCTTGGCATTCCTGATGAATCGTCGAGAGAACATATCCTCTCTTTGCTCACTCGCAATCTTCCACTTCAGGGTTCATTGGATCTAAAATACATAGCCAGGTCTACACCAGGATATGTCGGTGCTGATTTGGCAGCCTTGATTACGGGGGCGTGTAATTTGGCCTTGAAGAGAATTATTTCCAAAAGGAGAGGGGAACATGAGACAAGTTATCTTGGAGACTGGTGGGGCGAACCTTGGCCTCTTGAAGATATGGATAAGCTTGTCTACACAATGTCTGATTTCCAGGAAGCTTTGAAAATTGTACAACCTTCATTAAGAAGAGAGGGCTTCTCATCCATTCCTGATGAGAAATGGGAAGATGTTGGCGGCCTTGATTATTTAAGGAAGGAGTTTAAAAATAGAATAATAAGGCCGATAAAATATCCTGAGGTTCATCAGGCATCTAGGTTTGCAAATCAGACGGGAATTTTACTTTTTGGGCCCCCTGGTTGTGGTAAAACTCTTATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTTATATTAAGGTGGATGCTTTGTCAACCAAACGTGGTGCAGAAGGTGGATCAGGCATTGAACGAGTAGTGAATCAGTTACTAATTGAGCTAGACGGTGGGGGGCAACGCCAAAATGTTTTTGTCATTGGTGCAACAAATAGGCCTGATAGGATGGATGAGGCTCTCCTCCGTCCTGGTAGACTTGGTAAACAACTTTACGTTCCTCTGCCAAGCACTGACCAGCGGTTTTCAATATTGAAAGCTCTTACAAGGAAGGAGCCTGTTGATCCTACTGTGGATCTGGGAGCCATAGCTGAAGCGTGTGAAAATTTTAGTGGCGCAGACCTTGCTGAATTGGTGGATGAAGCAACTCGTGCTGCTCTTGATGAGAAATATACCGCAGTTGAAGAAGCTTTGACCTCAGTTGAAGCCTCTAGTGATACTTATACTTGCAAGCCAAGACATTTTGATATAGCACTTAGTAAGGTCTTTCCCTCTGTGTCTCCCGCGAAAAGGCGTAGGTATGAGCGCTTAGCAAAGCATTTTAAAGCATCATGA | 2328 | 0.4686 | MGRRNGKRSLHGTLRRWLESCMSSHSTVDDIVNHLRSTYPDYQRTKHQALTRLVQQVLEPRSKHATKVSAKRSGHNGDEESGRRALRKRQKRVDEGEERLQGDKETQGSASSSSASSLSASGSSGSEDDDGSTVSVSTSEDAKYREKYEPAVDLMKTMLRKAYTPTKDDSARKMKNVVQDKNVEMEVANSDKATNEICAKNGGGGKVKAASNLKGSVSNGDHGGGSFVKVKAGPRLSDLGGMNDLLEKLVEEVIVPWYYPELPRKLCRTPTTGILLHGPPGCGKTTLAHAIANETRVPFYPISATELVSGVSGASEENIRELFAKAYRTAPSIVFIDEIDSIASKRDNLQREMEKRIVTQLLASMDQSNRHMQSANGLDSSNVHPSYVLVIGATNRPDALDSALRRPGRFDREFVLGIPDESSREHILSLLTRNLPLQGSLDLKYIARSTPGYVGADLAALITGACNLALKRIISKRRGEHETSYLGDWWGEPWPLEDMDKLVYTMSDFQEALKIVQPSLRREGFSSIPDEKWEDVGGLDYLRKEFKNRIIRPIKYPEVHQASRFANQTGILLFGPPGCGKTLIAKAVANEAGANFIYIKVDALSTKRGAEGGSGIERVVNQLLIELDGGGQRQNVFVIGATNRPDRMDEALLRPGRLGKQLYVPLPSTDQRFSILKALTRKEPVDPTVDLGAIAEACENFSGADLAELVDEATRAALDEKYTAVEEALTSVEASSDTYTCKPRHFDIALSKVFPSVSPAKRRRYERLAKHFKAS* | 776 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy4g0551 | 775 | PANTHER | AAA-FAMILY ATPASE | 601 | 771 | - | - | |
| Ahy4g0551 | 775 | PANTHER | AAA-FAMILY ATPASE | 82 | 600 | - | - | |
| Ahy4g0551 | 775 | MobiDBLite | consensus disorder prediction | 105 | 139 | - | - | |
| Ahy4g0551 | 775 | CDD | AAA | 558 | 666 | - | - | |
| Ahy4g0551 | 775 | Gene3D | - | 670 | 769 | - | - | |
| Ahy4g0551 | 775 | ProSitePatterns | AAA-protein family signature. | 388 | 406 | IPR003960 | GO:0005524|GO:0016887 | |
| Ahy4g0551 | 775 | Gene3D | - | 519 | 602 | IPR027417 | - | |
| Ahy4g0551 | 775 | MobiDBLite | consensus disorder prediction | 71 | 104 | - | - | |
| Ahy4g0551 | 775 | ProSitePatterns | AAA-protein family signature. | 636 | 654 | IPR003960 | GO:0005524|GO:0016887 | |
| Ahy4g0551 | 775 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 529 | 772 | IPR027417 | - | |
| Ahy4g0551 | 775 | MobiDBLite | consensus disorder prediction | 57 | 143 | - | - | |
| Ahy4g0551 | 775 | Pfam | AAA+ lid domain | 441 | 475 | IPR041569 | - | |
| Ahy4g0551 | 775 | Pfam | AAA+ lid domain | 689 | 727 | IPR041569 | - | |
| Ahy4g0551 | 775 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 236 | 524 | IPR027417 | - | |
| Ahy4g0551 | 775 | Gene3D | - | 419 | 518 | - | - | |
| Ahy4g0551 | 775 | PANTHER | NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE | 601 | 771 | - | - | |
| Ahy4g0551 | 775 | PANTHER | NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE | 82 | 600 | - | - | |
| Ahy4g0551 | 775 | SMART | AAA_5 | 270 | 420 | IPR003593 | - | |
| Ahy4g0551 | 775 | SMART | AAA_5 | 567 | 668 | IPR003593 | - | |
| Ahy4g0551 | 775 | Pfam | ATPase family associated with various cellular activities (AAA) | 601 | 665 | IPR003959 | GO:0005524|GO:0016887 | |
| Ahy4g0551 | 775 | Pfam | ATPase family associated with various cellular activities (AAA) | 274 | 416 | IPR003959 | GO:0005524|GO:0016887 | |
| Ahy4g0551 | 775 | CDD | AAA | 266 | 417 | - | - | |
| Ahy4g0551 | 775 | Gene3D | - | 226 | 417 | IPR027417 | - | |
| Ahy4g0551 | 775 | Gene3D | - | 603 | 667 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy4g0551 | Ahy-Chr4 | 7294017 | 7298721 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy4g0551 | 508 | 773 | Calmodulin-binding Proteins | AT3G56690 | 35.179 | 1.91e-43 | 167 |