Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy4g0544 | ATGGGTGAACAATTGGGGCAACTCAAAATCATAGTGGTGCAAGGGAAGAGGTTGGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTCCTCAAACTAGGCAATCAGGAAGTGTTTGATAAAGATCTTTTGAAATCTGATGACAAGATGGGAAATGCATTCCTCAACCTTCAACCATTGGTCTCTGCAGCTAGACTAAGAGATATCTTAGGAGTCTCATCAGGTGAAACAACATTAAGGAAGGTCATACCTGACAACGAAAACTGCCTCGTCCGCGAAAGCAGTATCAATTGCGTAAATGGCGAGGTTGCGCAGAATGTTTGGTTAAGGCTGCGCGGGGTGGAGTCCGGCGAGGTAGAATTGACCATCAAGTTGGTCAAAAATGTTACCACCAAAACATAG | 405 | 0.4469 | MGEQLGQLKIIVVQGKRLVIRDFKSSDPYVVLKLGNQEVFDKDLLKSDDKMGNAFLNLQPLVSAARLRDILGVSSGETTLRKVIPDNENCLVRESSINCVNGEVAQNVWLRLRGVESGEVELTIKLVKNVTTKT* | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy4g0544 | 134 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 127 | IPR035892 | - | |
| Ahy4g0544 | 134 | Pfam | C2 domain | 6 | 37 | IPR000008 | - | |
| Ahy4g0544 | 134 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 11 | 1 | 37 | - | - | |
| Ahy4g0544 | 134 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 11 | 38 | 132 | - | - | |
| Ahy4g0544 | 134 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 37 | IPR044562 | - | |
| Ahy4g0544 | 134 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 38 | 132 | IPR044562 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy4g0544 | Ahy-Chr4 | 7138893 | 7141482 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy4g0544 | 1 | 127 | C2H2 Transcription Factor Family | AT4G21160 | 32.919 | 3.67e-20 | 82.4 |