Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0516 ATGGGGAGAAGAAATGGGGTAAGGGCACTGCAAGGAACCCTTCGCGGTCGGTTGGAGTCGTGCAAGTCCAGTTACTCCACTGTCGATGATATCGTTAACCACCTACGCTCCACTTACCCCGATTACCAACGCACCAAGCACCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTTCCAAACACGCGACCAAAGTGTCTGCCAAGCGCAGCGGCCACAATGGCGACGAAGAAAGTGGTCGAAGCGCGCTCCGAAAGAGACAGAAGAGAGTCGACGAAGGTGAAGAGAGGTTGCAGAAGATGGAGGCTTTGCACCTGCGAAAAAGGATGCAGGGCGAAAAAGAAACTCAGGGTTCTGCATCTTCGTCCTCTGCTTCAAGCTTGAGCCCGTCTGGAAGCAGCGGCGGTGAGGATGATGATGATGGCACAGTGTCTGTGTCGACATCGGAGGACGCAATTTACCGGGAGAAGTACGAACCTGCTGTCGATCTGATGAAGACGATGCTGCGAAAAGCGTATACTCCCACGAAGGATGATAGTGTGAGGAAGATGAAACACGTGGTGCAAGATAAGAACGTTGAAATGGAGGTCGCCAATAGTGACAAGGCTACTAATGAGATTTGTGCTAAGAATGGAAGCGGAGGCAAAGTGAAGGCGGCGTTGAATTTGAAGGGTTCCGTTTCAAATGGCGACCATGGTGGTGGCAGCTTTGTTGAGGTTAAGGCAGGACCTAGGTTAAGTGATTTGGGTGGGATGAAGGATCTTCTGGAAAAGCTGGTGAAAGAAGTGATTGTTCCATGGTACCATCCTGAGCTTCCAAGAAAGCTAGGTCGTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCCGGTTGCGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCCGTGTTCCCTTCTATCCGATATCAGCTACTGAGTTGGTTTCTGGAGTATCGGGTGCATCTGAAGAGAATATCAGAGAGCTTTTCGCCAAAGCGTATCGGACTGCCCCATCAATCGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGACAATTTACAGCGAGAGATGGAGAAAAGAATTGTTACACAGTTACTTGCCAGCATGGATCAATCAAGTAGGTGTATGCAATCTGCTAATGATTCGGACAGTTCTAATGTTCATCCTAAATATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTCTTGACTCAGCCTTGAGAAGGCCTGGGCGGTTTGATCGGGAGTTTGTTCTTGGCATTCCTGATGAATCGTCGAGAGAACATATCCTCTCCTTGCTCACTCGCAATCTTCCACTTCAGGGTTCATTGGATCTAAAAGACATAGCCAGGTCTACACCAGGATATGTCGGTGCTGATTTGGCAGCCTTGATTACGGGGGCTAGTAATTTGGCCATGAAGAGAATTATTTCCGAAAGGATAGGGGAGCATGAGACAAGTGATCTTGGAGACTGGTGGAGGGAACCTTGGCCTCTTGAAGATATGGATAAGCTTGTCTACACAATGTCTGATTTCCAGGAAGCTTTGAAAATTGTGCAACCTTCATTAAGAAGAGAGGGCTTCTCATCCATTCCCGATGAGAAATGGGAAGATGTTGGCGGCCTTGATTATTTAAGGAAGGAGTTTAAAAATAGAATAATAAGGCCGATAAAATATCCTGAGGTTTATCAGGCATTTAGGTTTGCAAATCAGACGGGAATTTTACTTTTTGGGCCCCCTGGTTGTGGTAAAACTCTTATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTCATGTTAAGGGGCCGGAGCTCATAAATAAATTTGTTGGAGAAAGTGAGAGAGAAATTCGACTAACGTTTAGTCGTGCAAGGGCATGTTCACCCTGTATATTATTTTTTGATGAGGTGGATGCTTTGTCAACCAAACGTGGTGCAGAAGGTGGATCAGGCATTGAGCGAGTGGTGAATCAGTTACTAGTTGAGCTAGATGGTGCGGGGCAATGCCAAAATGTTTTTGTCATTGGTGCAACAAATAGGCCTGATAGGATGGATGAGGCTCTCCTCCGTCCTGGTAGACTTGGTAAACAACTTTATGTTCCTCTGCCAAGCACTGACCAGCGGTTTTCAATATTGAAAGCTCTTGCAAGGAAGGAACCTCTTGATCCTACTGTGGATCTGAGAGCCATAGCTGAAGCGTGTGAAAATTTTAGTGGCGCAGACCTTGCTGAATTGGTGGATGAAGCAACTCGTGCTGCTCTTGATGAGAAATATACCGCAGTTGAAGAAGGTTTGACCTCAGTTGAAGCCTCTAGTGATACTTATACTTGCAAGCCAAGACATTTTGATATAGCACTTAGTAAGGTCTTTCCCTCTGTGTCTCCCGCGAAAAGGCGTAGGTATGAGCGCTTGGCAAAGCGTTTTAAAGCATCATGA 2469 0.4678 MGRRNGVRALQGTLRGRLESCKSSYSTVDDIVNHLRSTYPDYQRTKHQALTRLVQQVLEPRSKHATKVSAKRSGHNGDEESGRSALRKRQKRVDEGEERLQKMEALHLRKRMQGEKETQGSASSSSASSLSPSGSSGGEDDDDGTVSVSTSEDAIYREKYEPAVDLMKTMLRKAYTPTKDDSVRKMKHVVQDKNVEMEVANSDKATNEICAKNGSGGKVKAALNLKGSVSNGDHGGGSFVEVKAGPRLSDLGGMKDLLEKLVKEVIVPWYHPELPRKLGRTPTTGILLHGPPGCGKTTLAHAIANETRVPFYPISATELVSGVSGASEENIRELFAKAYRTAPSIVFIDEIDSIASKRDNLQREMEKRIVTQLLASMDQSSRCMQSANDSDSSNVHPKYVLVIGATNRPDALDSALRRPGRFDREFVLGIPDESSREHILSLLTRNLPLQGSLDLKDIARSTPGYVGADLAALITGASNLAMKRIISERIGEHETSDLGDWWREPWPLEDMDKLVYTMSDFQEALKIVQPSLRREGFSSIPDEKWEDVGGLDYLRKEFKNRIIRPIKYPEVYQAFRFANQTGILLFGPPGCGKTLIAKAVANEAGANFIHVKGPELINKFVGESEREIRLTFSRARACSPCILFFDEVDALSTKRGAEGGSGIERVVNQLLVELDGAGQCQNVFVIGATNRPDRMDEALLRPGRLGKQLYVPLPSTDQRFSILKALARKEPLDPTVDLRAIAEACENFSGADLAELVDEATRAALDEKYTAVEEGLTSVEASSDTYTCKPRHFDIALSKVFPSVSPAKRRRYERLAKRFKAS* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0516 822 Gene3D - 238 429 IPR027417 -
Ahy4g0516 822 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 77 818 - -
Ahy4g0516 822 Gene3D - 714 798 - -
Ahy4g0516 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 819 IPR027417 -
Ahy4g0516 822 ProSitePatterns AAA-protein family signature. 400 418 IPR003960 GO:0005524|GO:0016887
Ahy4g0516 822 MobiDBLite consensus disorder prediction 57 99 - -
Ahy4g0516 822 MobiDBLite consensus disorder prediction 71 99 - -
Ahy4g0516 822 Pfam Nucleolin binding domain 19 59 IPR031996 -
Ahy4g0516 822 CDD AAA 570 713 - -
Ahy4g0516 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 536 IPR027417 -
Ahy4g0516 822 CDD AAA 285 429 - -
Ahy4g0516 822 MobiDBLite consensus disorder prediction 117 152 - -
Ahy4g0516 822 Pfam AAA+ lid domain 736 773 IPR041569 -
Ahy4g0516 822 Pfam AAA+ lid domain 453 492 IPR041569 -
Ahy4g0516 822 Gene3D - 431 535 - -
Ahy4g0516 822 ProSitePatterns AAA-protein family signature. 683 701 IPR003960 GO:0005524|GO:0016887
Ahy4g0516 822 Gene3D - 541 813 IPR027417 -
Ahy4g0516 822 Coils Coil 86 106 - -
Ahy4g0516 822 Pfam ATPase family associated with various cellular activities (AAA) 286 428 IPR003959 GO:0005524|GO:0016887
Ahy4g0516 822 Pfam ATPase family associated with various cellular activities (AAA) 583 712 IPR003959 GO:0005524|GO:0016887
Ahy4g0516 822 SMART AAA_5 579 715 IPR003593 -
Ahy4g0516 822 SMART AAA_5 282 432 IPR003593 -
Ahy4g0516 822 PANTHER AAA-FAMILY ATPASE 77 818 - -
Ahy4g0516 822 MobiDBLite consensus disorder prediction 111 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0516 Ahy-Chr4 6683845 6688392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0516 520 820 Calmodulin-binding Proteins AT3G56690 42.345 1.28e-63 229