Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0515 ATGTTCAGTGATTTGGGTGGAATGAAGGATCTTCTGGAAAAGCTGATGACAAGAGTGATTGTTCCATGGTATCATTCTGAGCTTCCAAGAAAGCTAGGTCTCACTCCTACTACTGGAATCTTGCTGCATGGGCCACCCGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCAATGTTCCCTTATATCAGATATTACCAGGTGCATCTGAAGAAAACATCTCTGATGTTTTTGCTAAAGCATATAATACTCCCCGATCAATCATCTTCGTTGATGATATTGACCTAATTGATTCGAAAGGAATCAAATCACAGTTGCGGGACAGCATGGGTCATCATCACCTTCTTCTGATTGGAGCTACAAGTAGGCCGGAATCTCTTGACCCGGCTTTGAGAGGACTGCTTCGCGAAGAGTTTGTTTTAGCCGCTCCTGATGAAGCCGCGAGAAGAGACATACTGAAGTTGCTAACCTGCAAACTTAAGGGTACTTTTGATCTTGATGAGATAGCAAGATCAACGCGAGGATATGTCGGGGCTGATTTGGAAGGGGTAGTTAGGGAGGCAGGGAGATTACTGATGCGCAGAATCATCGGTGAGCGTAAAAGGGAATCTCAAAGTAATCCAGACTGGTGGAAGCAACCTATCTGGGGTGATTTGGGTAACCATGGCATCACAACATCTGATTTCCAGGATGCTGTGAAAAGAGTTCTACCTTTATTAATAAGAGAGGGCTTTTTAGCTGTTCCCGATGTAAAATGGGAAGATGTTGGGGGCCTGCATAATTTAAAGGAGGAGTTTAGAACACTTATGATAATGCCGTTAAAGTTTCCTAATATTTGTGAGACATTTGGGATTGAAAATCTGAAGGGATTTCTGCTTTTTGGGCCCCCTGGTTGTGGTAAAACTTTTATTGCCAAAGCTGTTGCCAATGAGGCTGGAGCAAATTTCATTCATATCAAGGGGCGTGAAAGCGAACGAGAAGTTCGACGAAGGTTTAGTCTTGCAAGGGCATGTACACCCTGTGTAGTACTTTTAGATGAGGTGGATGCTTTGTCAACCGAAAGCGCGGAAGTTGGATTTGGAAGCGTAATGAGCCAGCTACTTATTGAGCTAAACGATGACAAGGAGAGCCAAGGTGTTTTTGTCATTGGTACTACAAATAGCAGGACTGATGTGATAGAGGGGACTCTGTCCTCCTGGAAGAAACTTGGCAAACGTTTTTATGTTCCTATGCCAGGCGTTGATGAGCGATTTTCAATATTGAATGCTCTTGCAAGGAAGATACCTGTTGACCCTGCTGTGAATCTGAGAGACTTGGCTATAACTTGTGAAAATTTTAGTGGTGCAGAGTAG 1362 0.4405 MFSDLGGMKDLLEKLMTRVIVPWYHSELPRKLGLTPTTGILLHGPPGCGKTTLAHAIANETNVPLYQILPGASEENISDVFAKAYNTPRSIIFVDDIDLIDSKGIKSQLRDSMGHHHLLLIGATSRPESLDPALRGLLREEFVLAAPDEAARRDILKLLTCKLKGTFDLDEIARSTRGYVGADLEGVVREAGRLLMRRIIGERKRESQSNPDWWKQPIWGDLGNHGITTSDFQDAVKRVLPLLIREGFLAVPDVKWEDVGGLHNLKEEFRTLMIMPLKFPNICETFGIENLKGFLLFGPPGCGKTFIAKAVANEAGANFIHIKGRESEREVRRRFSLARACTPCVVLLDEVDALSTESAEVGFGSVMSQLLIELNDDKESQGVFVIGTTNSRTDVIEGTLSSWKKLGKRFYVPMPGVDERFSILNALARKIPVDPAVNLRDLAITCENFSGAE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0515 453 Pfam ATPase family associated with various cellular activities (AAA) 295 413 IPR003959 GO:0005524|GO:0016887
Ahy4g0515 453 Pfam ATPase family associated with various cellular activities (AAA) 40 141 IPR003959 GO:0005524|GO:0016887
Ahy4g0515 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 234 IPR027417 -
Ahy4g0515 453 Gene3D - 147 246 - -
Ahy4g0515 453 CDD AAA 292 397 - -
Ahy4g0515 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 452 IPR027417 -
Ahy4g0515 453 SMART AAA_5 290 416 IPR003593 -
Ahy4g0515 453 SMART AAA_5 36 148 IPR003593 -
Ahy4g0515 453 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 6 452 - -
Ahy4g0515 453 PANTHER AAA-FAMILY ATPASE 6 452 - -
Ahy4g0515 453 Gene3D - 415 453 - -
Ahy4g0515 453 Gene3D - 1 143 IPR027417 -
Ahy4g0515 453 Gene3D - 252 414 IPR027417 -
Ahy4g0515 453 CDD AAA 39 145 - -
Ahy4g0515 453 Pfam AAA+ lid domain 167 200 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0515 Ahy-Chr4 6663481 6668326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0515 32 453 Calmodulin-binding Proteins AT3G56690 30.784 3.03e-64 222