Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0513 ATGGACCTCTTAGCCGCCGCCACCGCCGCCGCCGCCGATGGCGACACTTTCCCGGTCCCTGACCACGTCGCACCATTCCCCGATTCCTGCGACCTCCTCTACGCCGCCATTCCCACATCCCTCCGCAGCAACCCCCAAAAGCTCCGCCCAATCCGCTCCGTCGCTGCCGCTAGAGCATCCTCTTCCCACCGTAACGGCCAGCTTCCAGAACCTCCCGATACCGGTGGTTCCCCTTCGGTTGAAGAAGATCGGCTTGGTGCCGGGTCGGGTCACGATGACGGGCGCACTCAGGAATCCGGCTCATCTTTGGATGATGATGATGGTAATGACATTGAAAATTCATCTGGGAGTGGCAAACATTCAGGCATGCCAAAGCGAAAGAGGAAGATGGAGAGAAGACTCGAAGATTTCGTGGAGAATATGGTAAAGAAGGTGATGGAAAAGCAAGAGCAGATGCATAAACAGTTAGTGGACATGATTGAAAAGAAGGAGAAGGAGAGGGTGATGAGAGAAGAAGCTTGGAAGCAGCAAGAGATTGAGAGAATAAGGAAGGACGAAGAGGCCAGAACCCAAGAGAGGTCACGAAACTTAGCCCTCATATCTATCATCCAAAATCTGCTTGGCCATGAGATTCAAATCCCGCAACCAGCAGAGGTAAGCAGCAAAGGAGAAGAGGACGAACCCGGACACGAAGGCGAGGAAGCGAATGCTCAAAAGAGTCTCGGCGTCAGCGGTGAGGGAAGTAACAACAGGTGGCCTGATGTTGAAGTTCAAGCGCTGATAACCTTGAGAACTTCAATGGAGCAGAAATTTCATCTTATGGGATCCAAGGTATCAATATGGGAGGAGATATCTGAAGCAATGAATAAAATGGGATACCACCGTTCTGCAAAGAAGTGCAAGGAAAAATGGGAGAACATCAACAAGTACTATAAAAGGACGATAGGGAGCGGCAAGAAGCGGCGTCAAAATAGTAAATCCTGCCCTTACTTTAATGAGTTGGATGTTCTATATAGCAATGGTCTCCTCAATCTTGGAAATCCCTTGAGCAGTAGTACCAATGATGTGTCCAAGATTGAAAAGGAGGAAAGTGAAATTTGA 1101 0.4968 MDLLAAATAAAADGDTFPVPDHVAPFPDSCDLLYAAIPTSLRSNPQKLRPIRSVAAARASSSHRNGQLPEPPDTGGSPSVEEDRLGAGSGHDDGRTQESGSSLDDDDGNDIENSSGSGKHSGMPKRKRKMERRLEDFVENMVKKVMEKQEQMHKQLVDMIEKKEKERVMREEAWKQQEIERIRKDEEARTQERSRNLALISIIQNLLGHEIQIPQPAEVSSKGEEDEPGHEGEEANAQKSLGVSGEGSNNRWPDVEVQALITLRTSMEQKFHLMGSKVSIWEEISEAMNKMGYHRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKSCPYFNELDVLYSNGLLNLGNPLSSSTNDVSKIEKEESEI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0513 366 Pfam Myb/SANT-like DNA-binding domain 250 336 IPR044822 -
Ahy4g0513 366 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 19 364 - -
Ahy4g0513 366 SMART sant 248 310 IPR001005 -
Ahy4g0513 366 Gene3D - 252 313 - -
Ahy4g0513 366 MobiDBLite consensus disorder prediction 47 129 - -
Ahy4g0513 366 Coils Coil 146 166 - -
Ahy4g0513 366 MobiDBLite consensus disorder prediction 220 234 - -
Ahy4g0513 366 ProSiteProfiles Myb-like domain profile. 244 308 IPR001005 -
Ahy4g0513 366 MobiDBLite consensus disorder prediction 217 250 - -
Ahy4g0513 366 CDD GT1 250 314 - -
Ahy4g0513 366 MobiDBLite consensus disorder prediction 85 102 - -
Ahy4g0513 366 PANTHER - 19 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0513 Ahy-Chr4 6628588 6630705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0513 1 338 Trihelix Transcription Factor Family AT5G47660 36.641 2.78e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy4g0513 Myb_DNA-bind_4 1.90E-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0513 - - aip:107638726 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0586 14 8073172 8075168 Ahy4g0513 4 6628588 6630705 hybridization