Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0511 ATGGCGGAATCGGACAACGAGTCAGGAGGACAAGGAGGGAACACGAGCGAGTTCAGGGAGCAGGACAGGTTCCTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTGCCGGCGAACGCGAAGATCTCGAAAGAGGCTAAGGAGACGGTGCAGGAGTGTGTGTCGGAGTTCATAAGCTTCATAACGGGTGAAGCCTCCGATAAGTGCCAAAAAGAAAAACGCAAGACCATCAACGGCGACGATCTGCTGTGGGCCATGACTACCCTTGGATTTGAGGAGTACGTGGAGCCTCTTAAGGTGTATCTACACAAGTATCGGGAGATGGAGGGTGAGAGGACTGCTTTGATTGGAGGTACTAGGCAGCATGCTGGTGCTGATCAGACCAACGACGGTGGTACTGGTGGTGGCGGGATTGTGCCATCACATATGATGATGATGATGGGGCATCAGCATCAGTCTCATGGACACATGTTTGGATCTGGTGGAGCGACTGGATCAGCATCTTCTCGAAGGATCACTAGGTAG 531 0.5311 MAESDNESGGQGGNTSEFREQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKVYLHKYREMEGERTALIGGTRQHAGADQTNDGGTGGGGIVPSHMMMMMGHQHQSHGHMFGSGGATGSASSRRITR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0511 176 MobiDBLite consensus disorder prediction 122 176 - -
Ahy4g0511 176 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 88 IPR003958 -
Ahy4g0511 176 ProSitePatterns NF-YB/HAP3 subunit signature. 55 71 IPR003956 GO:0005634|GO:0006355|GO:0043565
Ahy4g0511 176 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 158 IPR027113 GO:0001228|GO:0006355|GO:0016602
Ahy4g0511 176 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Ahy4g0511 176 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Ahy4g0511 176 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Ahy4g0511 176 SUPERFAMILY Histone-fold 21 122 IPR009072 GO:0046982
Ahy4g0511 176 MobiDBLite consensus disorder prediction 1 21 - -
Ahy4g0511 176 Gene3D Histone, subunit A 12 134 IPR009072 GO:0046982
Ahy4g0511 176 MobiDBLite consensus disorder prediction 159 176 - -
Ahy4g0511 176 MobiDBLite consensus disorder prediction 1 18 - -
Ahy4g0511 176 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0511 Ahy-Chr4 6610424 6611371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0511 1 156 CCAAT-HAP3 Transcription Factor Family AT4G14540 71.875 1.35e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Ahy4g0511 CBFD_NFYB_HMF 1.30E-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0511 K08065 - gmx:100778034 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0584 14 8058502 8060103 Ahy4g0511 4 6610424 6611371 hybridization
Ahy11g2261 11 136039806 136040812 Ahy4g0511 4 6610424 6611371 PCT
Ahy1g2596 1 104640641 104641746 Ahy4g0511 4 6610424 6611371 PCT