Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0500 ATGACTTCCATACCTTCAAAAAACTTATGGATTAGGAGGCAACAATGCCCTTGTGGAGATTGGAAGTGTTACATTACATATGAGGGTGATTCTGATGAAGGTTCTAGAGCAGAAGAATTGGTAAAGGCAGAAAAAGCTTCATCCGGTGCCATGATCACCCCATATGTTGGAATGGTATTTAAGAGTGATGATGAAGCTTTTGAGTATTATGGCAATTTTGCTAGAAAGAATGGGTTTTCTGTTAGGAAGGAAAGGTCTAGGGTTAGCCCCCAGTTGGGGATTTACAAGCGTGACTTTGTTTGTTACCGTTCTGGATTCGCCCCGGTGAAGAGGAAGGCCAATGGAGAACAGCATAGAGATAGGAAATCGGTTAGGTGTGGATGCGATGCGAAAATGTATCTGTCTAAGGAGGTGGTTGAAGGTGTTTCCCAGTGGTTTGTTGTGCAATTCAGCAATATCCACAATCATGAGCTATTGGAAGATGACCAAGTGCGTCTTCTTCCGGCTTATCGAAAGATTCACGAGGCTGATCAAGAGCGCATACTATTGCTTTCTAAAGCAGGGTTTCCAATACATCGGATAGTGAAGATGCTAGAGCTGGAAAAGGGGATTCAAGGTGGGCAATTGCCCTATTTGGAGAGGGATGTGAGGAACTTTGTTCAAAACCGTAAGAAGGTTGTTCAAGAGAACGAGGCATTGCTCAGTGAGAAGAGAGAAAACGATCTATCAGAACTTCTTGAGGCGTGCAAAGCCATGAAAGAAGTTGATGTTGACTTTGTTTATGATTTTACAGTGGATGAGAATGATAAAGTTGAAAATGTAGCTTGGTCATATGGTGACTCTGTTAATGCAAATGCTATGTTTGGGGATGTAGTTTATTTCGACACGACATATCGATCAATCACTTATGGATTGCTCTTTGGAGTGTGGTTTGGTATTGATAGCTGTGGCAGAACCATCTTTTTCGGTTCTGTTTTGTTGCAGGATGAAACTCCTCAGTCCTTCTCATGGGCATTGCAGACTTTTGTCCGATTCATGAACGGAAGATGTCCACAAACAATTCTAACTGATCTTGACCCCGGGCTTAAAGATGCCATTAGAAGCGAATATCCAGGAACTAAACATGTCATTCCACCATGGAATATTCTATACAAGGTACCAAGTTGGTTTTCTCTTCATGTTGGGCCACGCTATGCAGAATTTAAATCCATGTTTGATGCATTAATTCAAATTGAGAATACCGAGGAGTTTGAACTACAGTGGAGAGACATGATTTCTGTGTTTGGATTTGGTTCAGATAAACACATTGGTTTACTGTATTCTGTTCGAGCATCCTGGGCACAATCCTATGTGAGAGGTTACTTTCTAGCTCGAATGTCTACAATAGCTTACTCAAAATCAATAGATGCTTTTCTGAAAGGGATCTTCGCTTCACAAACATGTTTGCGTAGCTTTTTCGAGCAGATTGGCATTTCTGCAAACATCCAACATCAAGCGCATCAGGAGACTCACTATATGCATCTGAAAACTTGCATACCTGTTGAAGAGCATGCACGGAGTATCCTCACGCCTTTTGCTTTTAATGCTTTGCAGCAAGAGTTATTGCTGGCCATGCAATATGCTGCATCTGATATGGCCAATGGATCATATATTGTGCGGCATTTCAAAAGTATGGATGGAGAACGGCTTGTAATATGGTTGGCCGAAGACGAACAAATTCACTGCTCTTGCAAGGAATTTGAATCCTCTGGGATATTATGCAGACATGCTCTTCGTGTGTTCATCTTAAAGAATTACTTTCAGCTGCCTGACAAATACTATTTAAGCAGATGGAGACGGGAATGTACTTTACTGATCGATGATGATCACAACAATCAAATTACTGATGGGGAGTGGTTTCAAGAGTACCAGTCCCTAGCCGAAACTTTATTTTCAGAATCCTCGATTACAAAGGAACGATCTGACTATGCTCGAAGTGAACTGACAAAAGAACTTACCAGGATTCTCAATGAGGTCAGAAATCTGCCGGACACCGATGGAGTCCTAATGAACATGACTGTATCGCCGACCAGTTAG 2076 0.4176 MTSIPSKNLWIRRQQCPCGDWKCYITYEGDSDEGSRAEELVKAEKASSGAMITPYVGMVFKSDDEAFEYYGNFARKNGFSVRKERSRVSPQLGIYKRDFVCYRSGFAPVKRKANGEQHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNIHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPYLERDVRNFVQNRKKVVQENEALLSEKRENDLSELLEACKAMKEVDVDFVYDFTVDENDKVENVAWSYGDSVNANAMFGDVVYFDTTYRSITYGLLFGVWFGIDSCGRTIFFGSVLLQDETPQSFSWALQTFVRFMNGRCPQTILTDLDPGLKDAIRSEYPGTKHVIPPWNILYKVPSWFSLHVGPRYAEFKSMFDALIQIENTEEFELQWRDMISVFGFGSDKHIGLLYSVRASWAQSYVRGYFLARMSTIAYSKSIDAFLKGIFASQTCLRSFFEQIGISANIQHQAHQETHYMHLKTCIPVEEHARSILTPFAFNALQQELLLAMQYAASDMANGSYIVRHFKSMDGERLVIWLAEDEQIHCSCKEFESSGILCRHALRVFILKNYFQLPDKYYLSRWRRECTLLIDDDHNNQITDGEWFQEYQSLAETLFSESSITKERSDYARSELTKELTRILNEVRNLPDTDGVLMNMTVSPTS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0500 691 Pfam MULE transposase domain 291 382 IPR018289 -
Ahy4g0500 691 Pfam SWIM zinc finger 570 597 IPR007527 GO:0008270
Ahy4g0500 691 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Ahy4g0500 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 681 IPR031052 GO:0006355
Ahy4g0500 691 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Ahy4g0500 691 SMART 26again6 573 600 IPR006564 GO:0008270
Ahy4g0500 691 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0500 Ahy-Chr4 6504240 6507268 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy4g0500 MULE 1.20E-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0500 - - aprc:113874854 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0576 14 7980578 7983504 Ahy4g0500 4 6504240 6507268 hybridization