Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0488 ATGCAAACCTCCCAGAAACACTCAACCTCAGCTGGTATTCACATATACCACCAGCCAGTGCAAGGCATTGATCCTTACAATCATTACCAAATACTACAAAGCAATTCATGCCATGATATCCATGACAGTAGCAGCCAGGGGACCAATGTGTCGTTTGAAGCCTCGAAGGAGCAATACTATACCCTTGATTCATCCCCAGCAACCAATGGTCTCATAGGTTGTGATTCACCTTCCTGTGCTAGTGTATCATCCAGTAGGAGCCCTTTATCTCCACAGAATTCTCAGTCATACTATTCAGATCAGCACCAATCTTCTGACAACAACTATGGATCGCCAATAAGCGGTTACTCAAGTGCTGAAGATAGCTATGAATTGAAGAACAAGCTAAGAGAATTGGAGATTACATTATTGGGGCCAGAACCAGATATTGTTGATAGTTGTCACTGCTGCTTCAAGAGTGTTCACCAAGGAGCATCTCCAACGTCGAAGTACAATTGGGTTCAGATTGCTGAGATGATTCCAAAGTTGGACTTGAGAGACGTCCTCATTCTTTGTGCACAATCTGTGGCTGATGATGACATTCAAACAGCACTAGGGTGGATGGATAATGTGTTGGTGAAGATGGTATCTGTTGCTGGGGATCCGATACAGCGACTAGGTGCATACATGTTGGAAGGTCTTAGAGCAAGGTTTGAATCATCAGGGAGCTTAATTTACAAGGCATTGAAGTGTGAACAACCAACAAGCAAGGATCTAATGACTTATATGCATGTCTTGTACCAGATTTGCCCGTATTGGAAATTTGCTTACATATCTGCAAATGTTGTCATTGGAGAAGCAATGCAGAATGAAGCAAGGATTCACATAATTGACTTCCAAATTGCACAAGGCACACAGTGGTTCTTGCTCATGCAGGCTCTCGCTCGTAGGCCGGGTGGACCGCCATTCATCCGTGTCACTGGTATTGATGATTCCCAATCAAATCATGCCAGAGGTGGAGGACTTCACATTGTGGGAAAAAAGCTCTCAGAATATGCTAATTCTCTTGGGGTGCCCTTTGAGTTCCACAGTGCTGCAATGTGTGGATCAGAGGTTGAGCTAGAGAACCTTGTGATTCGGCCCGGCGAAGCTCTTGCTGTGAACTTCCCTTTTGTTCTGCACCACATGCCGGATGAGAGCGTAACCACTGAGAATCACAGGGACAGGCTATTGAGGTTGGTGAAGAGCTTGTCACCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAACACCTCACCTTTTTTCCAAAGGTTTGTTGAGACCCTTAATTACTACACTGCCATGTTCGAATCCATCGATGTGGCTCGTCCCAGGGACGATAAGCAGAGAATCAGCGCAGAACAGCACTGCGTGGCCCGCGACATTGTCAACATGATAGCTTGTGAGGGCCCTGAGAGGGTGGAAAGGCATGAGCTTCTAGGAAAATGGAGGTCAAGATTTTCCATGGCTGGTTTTTCACCTTGCCCTATGAGTTCTTCAGCTATGGCTGCAGTTAGAAGTCTCTTGAACGAGTTCAATGAGAATTATAGGGTTGAACAAAGAGATGGTGCTTTATACCTAGGATGGAAGAATAGAGCTATGGCCACTTCTTCTGCATGGACATGTTACTGA 1656 0.4535 MQTSQKHSTSAGIHIYHQPVQGIDPYNHYQILQSNSCHDIHDSSSQGTNVSFEASKEQYYTLDSSPATNGLIGCDSPSCASVSSSRSPLSPQNSQSYYSDQHQSSDNNYGSPISGYSSAEDSYELKNKLRELEITLLGPEPDIVDSCHCCFKSVHQGASPTSKYNWVQIAEMIPKLDLRDVLILCAQSVADDDIQTALGWMDNVLVKMVSVAGDPIQRLGAYMLEGLRARFESSGSLIYKALKCEQPTSKDLMTYMHVLYQICPYWKFAYISANVVIGEAMQNEARIHIIDFQIAQGTQWFLLMQALARRPGGPPFIRVTGIDDSQSNHARGGGLHIVGKKLSEYANSLGVPFEFHSAAMCGSEVELENLVIRPGEALAVNFPFVLHHMPDESVTTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLNYYTAMFESIDVARPRDDKQRISAEQHCVARDIVNMIACEGPERVERHELLGKWRSRFSMAGFSPCPMSSSAMAAVRSLLNEFNENYRVEQRDGALYLGWKNRAMATSSAWTCY* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0488 551 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Ahy4g0488 551 Pfam GRAS domain family 178 549 IPR005202 -
Ahy4g0488 551 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 549 - -
Ahy4g0488 551 MobiDBLite consensus disorder prediction 83 113 - -
Ahy4g0488 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0488 Ahy-Chr4 6359725 6363459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0488 1 548 GRAS Transcription Factor Family AT4G17230 58.439 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy4g0488 GRAS 3.40E-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0488 - - gmx:100819190 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0565 14 7761184 7764915 Ahy4g0488 4 6359725 6363459 hybridization
Ahy11g2281 11 136363721 136366758 Ahy4g0488 4 6359725 6363459 PCT
Ahy1g2575 1 104435471 104438533 Ahy4g0488 4 6359725 6363459 PCT