Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0420 ATGGCACTAATGCAGCGCCTAGCTAGAACAGCACGCACCCTCCGAACCCTAACCTCTCGCCCCCTTTCCCCTCACAAATCAGCACTTGCTTCATTCGCCGTGCCTCGAGTTTTGGGATCCGGACCCTCACGTGACGATGACTATCAGGCACCGTATTCGTTGCTTCCGGCTGTGTTAGCTGGCGCTTTCGGAATTGGATTGGCGGAGACGGTGTATGCTGATGCCGATCGCGGTGGCGTTGGCGGCGCTGAGGATGTGCACGCTGTTGCGAAGAAAGAACGCGAGCGCATTGAGGAGTTGCTTAGGAAGAAAGGAGTTCGTTATGGTTCTTATCCTCGCTTCACTGTTGCTGTTAAAGGACAAAAGGTCAGCGTTAAGTTTCAAATACCTCCTGCCTGTGAAGTCCCGCAACTTATTGCAAATCTCGCAACAAATCTTGGACTGAAAGCTGAAGGGAACGGAGGTGGATCGGATATGCTATTGCGATCTTGGGACAGCACAGTGGCTTGGCAGCTTGCCCTTACTCATCCGTCCAAGAAAAAGCATATTCAAGGGGATGATCCATCTTCAATAGATATGAATGGACATGATGGAGATCTTTGCATACTCTTTTTTCATTCTCTCATTGGCTCAGATAAAGCTGAAATTGAACTTATTAAGCAAGGGAACTTGAGTCCTGAAGAGCTTGATGCTTTCGTCTCTGTTTTACAATTAGCTGGTAGCAAGATGGGACAAAGAAGTGCCCCCCTGGAAAGGAAGTCAAGGGAAGAGACTGAACAGTCGCCATCTGTAGATAAATCTATTTCTAGTCTTGAGGCCATGGGAGTGAGAATTTATGGATTGAATGAACCCATTGGTATATCAAATGGTGAGGTATCATGGGACAACATTGCTGGATATGAGCATCAAAAACGAGTAATAGAAGATACAATACTGTTGGCTTTGCATAGTCCTGAAGTATATGACAATATTGCACGAGGGACTCGTCAAAAGTTTGAATCAAACCGGCCTCGAGCTGTGCTGTTTGAAGGTCCACCAGGTACAGGGAAAACTTCTTGTGCTCGCGTTATTGCCAATCAAGCAGGTGTCCCTTTGTTATATGTTCCACTTGAGGCTGTAATGTCTGAATACTACGGTAAAAGTGAACGCCTTCTGGGAAAAGTGTTTTCACTTGCAAATGAACTTCCTAATGGTGCTATTATATTTCTGGATGAGATTGATTCTTTTGCTGCTGCTCGGGATAATGAAATGCATGAAGCTACAAGGAGAATATTGTCAGTGTTGTTACGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTGGTCGTGATTGCTGCTACCAATAGAAAGGAAGACCTTGATCCTGCATTAATCAGCCGATTTGATACTATGATCCCTTTTGGCTTACCTGATCACCGTAATCGTCAGCAAATAGCATCCAAATATGCAAAGCACCTAACCAAACCTGAACTAGATGAACTTGCCAGAGCTACAGAAGATATGTCCGGAAGAGACATTCGTGATGTTTGTCAGCAAGCAGAACGATCATGGGCATCAAAGATTATTCGAGGGCAAGTATCCAAAGATGGTGAACAAGAAAGTCTTCCACCTTTGCAAGAGTATATAGAGTGCGCCACAATTCGGCAAAACTCACTGCTCAGTGCTGCTGCTGGCAGGAATTTCCGAAATTTTCCCCATCTTAGGATGGCAACCGACTGA 1719 0.4543 MALMQRLARTARTLRTLTSRPLSPHKSALASFAVPRVLGSGPSRDDDYQAPYSLLPAVLAGAFGIGLAETVYADADRGGVGGAEDVHAVAKKERERIEELLRKKGVRYGSYPRFTVAVKGQKVSVKFQIPPACEVPQLIANLATNLGLKAEGNGGGSDMLLRSWDSTVAWQLALTHPSKKKHIQGDDPSSIDMNGHDGDLCILFFHSLIGSDKAEIELIKQGNLSPEELDAFVSVLQLAGSKMGQRSAPLERKSREETEQSPSVDKSISSLEAMGVRIYGLNEPIGISNGEVSWDNIAGYEHQKRVIEDTILLALHSPEVYDNIARGTRQKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEAVMSEYYGKSERLLGKVFSLANELPNGAIIFLDEIDSFAAARDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTMIPFGLPDHRNRQQIASKYAKHLTKPELDELARATEDMSGRDIRDVCQQAERSWASKIIRGQVSKDGEQESLPPLQEYIECATIRQNSLLSAAAGRNFRNFPHLRMATD* 573
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0420 572 CDD AAA 329 469 - -
Ahy4g0420 572 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 24 555 - -
Ahy4g0420 572 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 520 IPR027417 -
Ahy4g0420 572 MobiDBLite consensus disorder prediction 244 267 - -
Ahy4g0420 572 Gene3D - 470 531 - -
Ahy4g0420 572 Gene3D - 291 469 IPR027417 -
Ahy4g0420 572 SMART AAA_5 336 471 IPR003593 -
Ahy4g0420 572 Coils Coil 83 103 - -
Ahy4g0420 572 Pfam ATPase family associated with various cellular activities (AAA) 340 468 IPR003959 GO:0005524|GO:0016887
Ahy4g0420 572 ProSitePatterns AAA-protein family signature. 441 460 IPR003960 GO:0005524|GO:0016887
Ahy4g0420 572 MobiDBLite consensus disorder prediction 248 262 - -
Ahy4g0420 572 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 24 555 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy4g0420 Ahy-Chr4 5340354 5346887 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0420 336 536 Calmodulin-binding Proteins AT3G56690 36.364 1.34e-27 116
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0502 14 6689659 6696244 Ahy4g0420 4 5340354 5346887 hybridization