Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0415 ATGAGCAGAAAGCCAAACGCAAGAAAACAGCAGCATGTTCCATTGATTGATCTCCATATTCTCTGTTATCTTCTCTTGTTCCCTGCCACAACCACAAAATCCGAAGCTAAATGCAGTTCTGGGTGCAACCTTGCACTAGCTTCCTACTACCTATGGCCAGGAACAAACCTCACTTACATCACCACCATCTTCGGAAAACCACAGTCAGAGATTCTGAAATACAACCCTGAAATAAAAAACCCAGATTCCATTGATAAGCAAGAAAGGATCAACGTTCCCTTCTCATGTGACTGCTTGAACGGTGATTTCTTAGGTCACACTTTTTCATACGAAACACATCGCGGTGACACGTACAATAACATTGCTCATGTTGCTTTCTCAAACCTCACAACTGAGGAGTGGCTGAGTAGGGTTAATAGCTATCCAGCTTTAAACATTCCTGATGGTGTTCAGATCAATGTCACTGTAAATTGTTCCTGCGGAGATATACATGTGTCTAAAGATTATGGATTGTTTGCCACGTATCCCCTTAGGATCGGCCAGGATTTGAAGACGGTGGCGGCCGAATCCGCCGTGCCGGCCGAGTTGCTGCAGAGGTACAATCAGGGCTCTGATTTTGGTGCCGGGAATGGGATTGTTTTTGTGCCGGCCAAAGATGAAAATGGAAAGTTTCCGCCACTGCCATTGGGATCAGGAATCTCTGGTGGAGCCATTGCTAGCATTATTGGAGGTGCTGTTGCTGGATTATTACTATTGGCACTTGTTCTCTATTTTGCTCTATTTAGAAGAAAGAAAGTGGTGGCTGAGGTGTCCCTTCTCCCTCATGATCAATTCACTCAACTCCAACATGGTTGTGGAAGCAGGTTGAGTAAGGGATCAGAATCTTCCCCTGTGATTTCACCAAGGTTGACCGGTATTACAGTTGACAAATCAGTGGAGTTCTCATATGAACAGTTGGCCAAAGCTACTAATGGCTTTAGCATAGCTAACAAAATTGGTCAAGGTGGTTTTGGTTCTGTATACTATGCAGAGCTTAGGGATGAGAAAGCTGCAATTAAGAAAATGGATATGCAAGCATCAAAAGAATTCCTTGCTGAACTCAAGGTTCTAACACACGTCCATCACTTGAACTTGGTGCGTTTAATAGGATACTGTGTTGAAGGCTCCTTATTTTTGGTTTATGAATACATTGAGAATGGCAATCTAAGTCAACATTTGCGTGGCTCGGGGAGGGATTCATTATCATGGCCTATTAGAGTTCAAATTGCACTGGATTCAGCAAGAGGACTGGAATACATTCATGAGCATACAGTTCCTGTCTATATCCATAGAGATATTAAGTCAGCAAACATTTTGATAGACAAAAACTTTCGCGGAAAGGTTGCAGATTTTGGTTTAACAAGATTGACTGAATATGGTAGCTCTTCATTACAGACACGTCTTGTTGGTACATTTGGCTATATGCCTCCAGAATATGCACAGTATGGTGAAGTTTCCCCCAAAATAGATGTATATGCTTTTGGTGTTGTTCTCTATGAACTCATATCCGGAAAGGAAGCTATTATCAAGACAAATGAGATTGTGACCGAATCAAAAGGGCTAGTTGCCTTGTTTGAAGAGGTTCTTAGTCAAACAGATCCAAAAGAAGATCTTTCAAAATATGTTGACCCTAGACTTGGTGACAACTACCCTGTTGACTCTGTATTTAAGATGTGTCAACTTGCTAGAGCATGCACACATGAAAATCCTCAACTAAGGCCAAGCATGAGATCAATTGTGGTAGCATTAATGACACTTTCGTCAGCAACTGAGGATTGGGATGTTGGCTCTTTCTATGAAAACCAAGCTTTGGTGTATCTAATGGCTGGAAGGTAG 1875 0.4213 MSRKPNARKQQHVPLIDLHILCYLLLFPATTTKSEAKCSSGCNLALASYYLWPGTNLTYITTIFGKPQSEILKYNPEIKNPDSIDKQERINVPFSCDCLNGDFLGHTFSYETHRGDTYNNIAHVAFSNLTTEEWLSRVNSYPALNIPDGVQINVTVNCSCGDIHVSKDYGLFATYPLRIGQDLKTVAAESAVPAELLQRYNQGSDFGAGNGIVFVPAKDENGKFPPLPLGSGISGGAIASIIGGAVAGLLLLALVLYFALFRRKKVVAEVSLLPHDQFTQLQHGCGSRLSKGSESSPVISPRLTGITVDKSVEFSYEQLAKATNGFSIANKIGQGGFGSVYYAELRDEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDSLSWPIRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTRLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISGKEAIIKTNEIVTESKGLVALFEEVLSQTDPKEDLSKYVDPRLGDNYPVDSVFKMCQLARACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVYLMAGR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0415 624 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Ahy4g0415 624 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 624 IPR044812 GO:0019199|GO:0045087
Ahy4g0415 624 Gene3D Phosphorylase Kinase; domain 1 311 396 - -
Ahy4g0415 624 SUPERFAMILY Protein kinase-like (PK-like) 301 596 IPR011009 -
Ahy4g0415 624 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 15 624 - -
Ahy4g0415 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Ahy4g0415 624 Gene3D Transferase(Phosphotransferase) domain 1 397 608 - -
Ahy4g0415 624 SMART serkin_6 326 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0415 624 Pfam Protein tyrosine and serine/threonine kinase 328 595 IPR001245 GO:0004672|GO:0006468
Ahy4g0415 624 CDD STKc_IRAK 332 593 - -
Ahy4g0415 624 ProSiteProfiles Protein kinase domain profile. 326 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0415 Ahy-Chr4 5204584 5211295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0415 16 624 Receptor kinase-like Gene Family AT3G21630 57.488 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ahy4g0415 PK_Tyr_Ser-Thr 2.80E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0415 - K13429 gmx:100802308 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0495 14 6508256 6520822 Ahy4g0415 4 5204584 5211295 hybridization