Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0406 ATGGACAAGGGATGGGGTCTCACCCTTGAAACTTGTTCCTCTCCAACCATCCCATTCTTTCATTCTTCTTCGGCTGCTGCTTCTTCTTCTTCTTCGTCGCATAAGACTAAGATGTTTCCGCTGTTGGGATTCCCCGTCAACCTTACTCGTCCCGCCGATGATCATAACAACGATGACAGTAACCGCAAGGTGGTTGTTGACTTCTTCTCCGATAACAGGAACAAGGGACAAGAGCAGCAGCATGTTAAGCCCAACATCTCCGTCAAGAAGGAGATTCCTCACCATGATGATATACCTTCGTCCACCAAAGTTTATACGGGTTTGCAACTGCTTACTGCCAACACTGGAAGCGATGAATCTACGGTGGATGATGGTGGAGTAGTATCATCAGATGGTGAAGATAAGAAAGCCAAGGCAATTGAGCTAGCGATGTTGCAAGTGGAGCTTGAACGCATGAATGCCGAGAACCATAAGCTGAAAGAGATGCTGAACCACGTGAGCGGTAACTACACGGCCTTGCAAATGCATCTTGTTACATTACTGCAACAGCAGCAACAAGAACAAGTAGATGATGAGGTTGTTGAAGGAAAAGTAGTAGTGGGAGGGGAAGCCAGACAGTTGCTTGATGTAGGAAACGATCAAGCATCAGATTCTTCTTCTGATGAAAGAACACGATCCAGCACACCTCATGCCCAAGTTGGAATCAGGAATAATAGCAATGGAAAGAACGAGAGGGAAGACAGTCCAGATTCACAATCACAAGCTTGGGGTCCCGCTCCCAACAAGCTCCAAAAACCCAACCCCACCATGGACCAATCCTCTTCTGAAGCCACCATGAGAAAAGCCCGTGTCTCAGTCCGTGCTCGCTCAGAAGCTCCCATGATCAGTGATGGATGCCAGTGGAGAAAATATGGACAAAAAATGGCAAAGGGAAATCCATGTCCTCGAGCTTATTACAGATGCACTATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAGGACAGAACTATTTTGGTAACTACATATGAAGGAACACACAGCCATCCGCTACCACCGGCAGCCATGGCCATGGCATCAACCACCACAGCAGCTGCCACCATGTTACTATCAGGTTCCATGTCAAGTGCAGATGGAATCATGAACCCAAACCTCCTAGCAAGAGCTATTTTTCCATCGTGCCCTACTTCTTCTACTTCTTCAAGCATGGCAACACTCTCAGCTTCGGCACCATTCCCAACTGTCACATTGGACCTCACACAAAACCCATCATCATCAAATAATACTAATAATACTTCCACTCCTCCAATAAGGCATCATCATCCTCTTAATGCTGTCCCTTTGTTCCAGCTACCCAATTTCCAAGGCCACCCCCAGAACTTTGGGACTCAAGCCCTATATAATCAATCAAAATTCTCCGGTCTTCAATTGTCTCAACAAGTTGCTGCCTCTTCCCAATTGGAAACCCAAGCTTCAAGGCCGCCTTTGCACCACAACCAACCACAGCAACAGCCGCCATCCCTGGCTGATTCCGTCACCGCAGCCATCACCACCGATCCTAACTTCACTGCCGCTATCGCAGCCGCCATCTCCTCCATCATCGGAGGTAACAATAATAATAATCAACCAAACAGCACTGGAGACGGTAACAACAACAACAGCGGCAGCAATCCTAGTATGAGCAACAGGACAACAATTAGCAGCTTTTCGGGGAATTAA 1731 0.4749 MDKGWGLTLETCSSPTIPFFHSSSAAASSSSSSHKTKMFPLLGFPVNLTRPADDHNNDDSNRKVVVDFFSDNRNKGQEQQHVKPNISVKKEIPHHDDIPSSTKVYTGLQLLTANTGSDESTVDDGGVVSSDGEDKKAKAIELAMLQVELERMNAENHKLKEMLNHVSGNYTALQMHLVTLLQQQQQEQVDDEVVEGKVVVGGEARQLLDVGNDQASDSSSDERTRSSTPHAQVGIRNNSNGKNEREDSPDSQSQAWGPAPNKLQKPNPTMDQSSSEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILVTTYEGTHSHPLPPAAMAMASTTTAAATMLLSGSMSSADGIMNPNLLARAIFPSCPTSSTSSSMATLSASAPFPTVTLDLTQNPSSSNNTNNTSTPPIRHHHPLNAVPLFQLPNFQGHPQNFGTQALYNQSKFSGLQLSQQVAASSQLETQASRPPLHHNQPQQQPPSLADSVTAAITTDPNFTAAIAAAISSIIGGNNNNNQPNSTGDGNNNNSGSNPSMSNRTTISSFSGN* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0406 576 Gene3D WRKY domain 280 357 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g0406 576 SMART WRKY_cls 295 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g0406 576 MobiDBLite consensus disorder prediction 420 442 - -
Ahy4g0406 576 MobiDBLite consensus disorder prediction 487 514 - -
Ahy4g0406 576 MobiDBLite consensus disorder prediction 420 445 - -
Ahy4g0406 576 PANTHER WRKY TRANSCRIPTION FACTOR 6 37 552 - -
Ahy4g0406 576 MobiDBLite consensus disorder prediction 205 289 - -
Ahy4g0406 576 ProSiteProfiles WRKY domain profile. 290 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g0406 576 MobiDBLite consensus disorder prediction 250 280 - -
Ahy4g0406 576 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 552 IPR044810 GO:0003700
Ahy4g0406 576 Coils Coil 135 169 - -
Ahy4g0406 576 MobiDBLite consensus disorder prediction 543 576 - -
Ahy4g0406 576 SUPERFAMILY WRKY DNA-binding domain 288 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g0406 576 MobiDBLite consensus disorder prediction 225 239 - -
Ahy4g0406 576 Pfam WRKY DNA -binding domain 297 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0406 Ahy-Chr4 5113731 5116257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0406 1 557 WRKY Transcription Factor Family AT1G62300 48.282 1.30e-138 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy4g0406 WRKY 1.50E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0406 - - ccaj:109803638 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0484 14 6391828 6394299 Ahy4g0406 4 5113731 5116257 hybridization