Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0393 ATGAAGAGTGAAGACGAGCGCGTTCTCATAATCGTCAAAAGTTCACCAACTACAAGTATGTCAGCGTCATCATCATCTTCTTCTTCTTCTTGTGCTTCTTTCTCTCTAGCTAGCAGTGGTGAGCCTTTGTCAACAGCTCTAAGCTTGAAGGCACCAATGGTTAGGCCTTATGTCAGATCCAGAATGCCTCGAATTTGTTGGACACCAGATCTCCACCGTTGCTTCCTGCATGCAATCCAACGGCTTGGAGGAGTTGATAGGGCGACGCCAAAGATGGTTATGCAGCTAATGAATGTTAAGGGGGTTACCATATCTCATGTTAAAAGCCACCTACAGATGTACAGGAGCGTGAAGCAGGAAGAGATGAAACAAGCCGAAAGGAAGAAGAAAATAACGGCATCAAAAGAATTGCTGCTGCTTTCTTCATTGTCGTCACCAAGCATTAAACCATTAAGGTGGACCGGTCAACAGAGTCTTCTGCAAGGGAGCTATGGAATTAGTTATTATACCGAAGAATTTGCTCGCACCAGACTCCAAGATCTTTGGAATGAGCAGCAGCAGCAAGAGTCTCAGAATTATGCAAAGCTAGGGAGTAAGCAGTCTACTATAGTTTGTAAGGAGAATGATGAACAGAAGACTCACACTTACATCATTTTCCGAGATATTCTCACACCCCACACTGCCCAAGGGAACAATAAGGATGGTGGGGGTAGAAAGGTGTCATCATCAGAAGAGATTGGTACAAGTAGCAGATTCGAAGATAGAAGCGAGAAAGGAAAGAGAGTGAGAGTGTGTGATGAAGGAAAAAACAACATGGCGTCTCTGTCACAGATGATGAGTCCAGTTAGGAATGATATCTCCCTTGAGCTCAAGCTTTCTTTATCACATCATCATCATATGCCATAG 906 0.4393 MKSEDERVLIIVKSSPTTSMSASSSSSSSSCASFSLASSGEPLSTALSLKAPMVRPYVRSRMPRICWTPDLHRCFLHAIQRLGGVDRATPKMVMQLMNVKGVTISHVKSHLQMYRSVKQEEMKQAERKKKITASKELLLLSSLSSPSIKPLRWTGQQSLLQGSYGISYYTEEFARTRLQDLWNEQQQQESQNYAKLGSKQSTIVCKENDEQKTHTYIIFRDILTPHTAQGNNKDGGGRKVSSSEEIGTSSRFEDRSEKGKRVRVCDEGKNNMASLSQMMSPVRNDISLELKLSLSHHHHMP* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0393 301 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 18 294 - -
Ahy4g0393 301 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 63 116 IPR006447 GO:0003677
Ahy4g0393 301 SUPERFAMILY Homeodomain-like 61 119 IPR009057 -
Ahy4g0393 301 MobiDBLite consensus disorder prediction 248 262 - -
Ahy4g0393 301 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Ahy4g0393 301 Gene3D - 62 119 - -
Ahy4g0393 301 MobiDBLite consensus disorder prediction 227 247 - -
Ahy4g0393 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 18 294 IPR044848 GO:0003700
Ahy4g0393 301 MobiDBLite consensus disorder prediction 227 262 - -
Ahy4g0393 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 119 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0393 Ahy-Chr4 5015188 5018415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0393 54 120 G2-like Transcription Factor Family AT2G42660 68.657 3.80e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy4g0393 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0393 - - adu:107482892 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0471 14 6258307 6261908 Ahy4g0393 4 5015188 5018415 hybridization