Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0388 ATGGCTGAGACTGCACAACCTAATGCTGAGTTGTTGGAATGGCCGAAGAAAGATAAGCGCCGCTTCCTTCATGCTGTGTACCGTGTTGGTGACCTTGATCGCACCATCAAGTTTTATACTGAAGCTTTTGGAATGAAGCTCTTGAGGAAAAGGGATGTTCCCGAGGAGAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAACACTCCAACTTTGTTGTGGAATTGACATATAATTATGGGGTTACATCGTACGATATTGGAACTGGATTTGGACATTTTGCTATTGCAACTCCAGATGTTTACAAATTGGTTGAAGACATCAGGGCTAAGGGTGGAAATGTCACTAGGGAGCCTGGTCCTGTTAAGGGCGGGTCATCGGTTATTGCCTTTGTCAAGGATCCTGATGGTTACACTTTCGAGCTCATCCAAAGAGCTTCAACCCCTGAGCCACTGTGTCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCGATTAAGTTTTACGAAAAGGCTTTAGGTATGAAGGTGGTGAAGAAAGTTGACAGACCTGAATACAAGTACACCATAGCTATGCTTGGATATGCAGAGGAGCACGAGACAACTGTGTTGGAGTTGACATATAACTATGGTGTCACCGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGTACCGATGATGTATACAAGAGCGCTGAGGTAATCAACCATGTAACACAAGAGCTTGGAGGAAAGATTACTCGCCAACCAGGGCCAATTCCTGGCATTAACACCAAGATTGTTTCTTTCTTGGATCCGGATGGATGGAAAACTGTGTTGGTGGACAACGAAGATTTCCTGAAGGAACTGCAGTGA 864 0.4456 MAETAQPNAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTEAFGMKLLRKRDVPEEKYANAFLGFGPEHSNFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTREPGPVKGGSSVIAFVKDPDGYTFELIQRASTPEPLCQVMLRVGDLERSIKFYEKALGMKVVKKVDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVINHVTQELGGKITRQPGPIPGINTKIVSFLDPDGWKTVLVDNEDFLKELQ* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0388 287 TIGRFAM glyox_I: lactoylglutathione lyase 152 282 IPR004361 GO:0004462|GO:0046872
Ahy4g0388 287 TIGRFAM glyox_I: lactoylglutathione lyase 9 154 IPR004361 GO:0004462|GO:0046872
Ahy4g0388 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 145 IPR037523 -
Ahy4g0388 287 Gene3D - 148 287 IPR029068 -
Ahy4g0388 287 Gene3D - 1 147 IPR029068 -
Ahy4g0388 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 151 279 IPR037523 -
Ahy4g0388 287 PANTHER LACTOYLGLUTATHIONE LYASE 11 287 - -
Ahy4g0388 287 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 11 287 - -
Ahy4g0388 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 148 IPR029068 -
Ahy4g0388 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 152 278 IPR029068 -
Ahy4g0388 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 142 IPR004360 -
Ahy4g0388 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 273 IPR004360 -
Ahy4g0388 287 ProSitePatterns Glyoxalase I signature 1. 154 175 IPR018146 GO:0004462|GO:0046872
Ahy4g0388 287 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Ahy4g0388 287 CDD GlxI_Ni 23 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0388 Ahy-Chr4 4945191 4948249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0388 154 278 Calmodulin-binding Proteins AT1G08110 29.333 7.95e-12 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0467 14 6202261 6205357 Ahy4g0388 4 4945191 4948249 hybridization
Ahy11g2361 11 137854061 137855955 Ahy4g0388 4 4945191 4948249 PCT
Ahy1g2518 1 103643133 103645134 Ahy4g0388 4 4945191 4948249 PCT