Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0372 ATGGCCGTCGGAAAAAACAAGCGCATCTCCAAGGGAAAGAAGGGTGGCAAAAAGAAGGCCGCCGATCCCTTTGCCAAGAAGGATTGGTACGATATCAAGGCTCCTTCCGTCTTCCAGGTCAAGAATGTGGGCAAAACCCTTGTTACTCGCACTCAGGGCAACAAGATTGCTTCTGAAGGACTCAAACATAGAGTGTTTGAGGTCTCACTTGCTGATCTTCAAGGGGATGAGGACCACGCCTTCCGGAAGATTAGACTGAGAGCAGAAGATGTACAAGGAAGGAATGTGCTCACAAATTTCTGGGGAATGGATTTTACTACTGACAAGCTGAGGTCGCTTGTCAAAAAATGGCAAACTTTGATTGAAGCTTTCGTGGATGTGAAGACCACAGATAATTATATTTTGAGGCTTTTCTTTATTGGGTTTACCAAAAGACGGTATAACCAAATGAAAAGAACCTCTTATGCCCAATCAGGGCAAATTCGGCAGATTCGCAGGAAGATGAGGGAGATCATGACCAAGCAGGCAACATCCTGTGATCTCAAGGAGTTGGTCCGTAAGTTTATCCCAGAAATGATTGGGAAAGAGATCGAGAAGGCTACTTCTAACATTTACCCTCTTCAAAATGGGTTTATCAGGAAAGTTAAGATCCTGAAAGCCCCAAAATTTGATATGGGGAAATTGATGGAGGTCCACGGTGGTGACTATGCTGAAGATATTGGTGACAAAGTGGACAGGTCTGTTGATGAACCAATGGCCGAGGCTGGGGCTGAAGTTGTTGGCGTTTAA 789 0.4499 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGNKIASEGLKHRVFEVSLADLQGDEDHAFRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVKKWQTLIEAFVDVKTTDNYILRLFFIGFTKRRYNQMKRTSYAQSGQIRQIRRKMREIMTKQATSCDLKELVRKFIPEMIGKEIEKATSNIYPLQNGFIRKVKILKAPKFDMGKLMEVHGGDYAEDIGDKVDRSVDEPMAEAGAEVVGV* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0372 262 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Ahy4g0372 262 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Ahy4g0372 262 MobiDBLite consensus disorder prediction 1 20 - -
Ahy4g0372 262 MobiDBLite consensus disorder prediction 1 15 - -
Ahy4g0372 262 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Ahy4g0372 262 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 261 - -
Ahy4g0372 262 Hamap 40S ribosomal protein S1 [RPS3A]. 1 257 IPR027500 GO:0003735|GO:0005840|GO:0006412
Ahy4g0372 262 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0372 Ahy-Chr4 4661814 4663814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0372 1 261 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 80.843 1.34e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0372 K02984 - gmx:100813273 421.779