Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0342 ATGCATGCAATGATGTTTCTTGAGCAGAAGTATCACCTAATGTTCTGTTTCTTCCTAGCTTTACTTCCATTTGCCAGTGTTGGTCAGAGCCATAAGAACATTTCATTGGGTTCTTCCCACACTGCACAAGCAGGTGATTCCACTTGGGCTGTATCACCATCTGGTAACTTTGCAGTTGGTTTCCAACAGATTGAGGAGAATGGGTTCTTGCTATCCATTTGGTTCAACCAAATACCGCAAAGGACCATTGTTTGGTCAGCCAATGGAGGAAACCTTGCACCAAAAGGTTCCAAAGTTGAGCTTACCTCAGATGGATTTTTCTTGCTGAATGATCCCACCGGCAACCGAATATGGTCTGCTGGATCCTCCGGCAGTGGAACATCCCATGCTGCCATGGTTGATACCGGCAATTTCGTGTTGGCGAGTCAAAGCACCGAGTACTTATGGCAAAGTTTTGATCATCCCACTGACACAATCTTACCAGGACAAGTTCTAAATCAACCAAGTACTCTTGTTTCTAGATATTTGGAAACAAATTACTCAAGTGGAAGATTTAAGTTTATATTAAAAGATGATGGGAACCTTGCACTTTATACTACACAGTATCCGTGGAGCTCTTCAAATTTTAATTATTGGAATACAAATACTTCTGGCAGTGACTTCTCATTAGTCTTCAATCAATCTGGGGTTCTTTTCCTTCGGGCAAACAACGGAAGCATAATCAGCATGATATCATCAAATACTCCTTCCACCCAAGATTTCTACCAGAGAGCAGTGCTTGAATATGATGGAGTTTTCAGGCATTATGCCTACCCGAAGAGCAGTAACTCCAATACAAGAAGCTGGAAGATGGCATGGTCAACTGTTTATTACTTACCGCCAAATATCTGCTTGGATATTACGGAAGATTATGGCAGTGGAGCTTGTGGATTCAACAGTTATTGCACTTTTGATGATGGGAAAAAGAGTTGCCATTGTCCATCTGGATATAGCTTCATTGATCCAGCGGATGTGATGAAAGGATGCAGACCGGACTTTGATTCACAAAGTTGTGATGGATCTTCCCCAGAAACAGATCTTTTTGATTTCTATGAGATGGAAAATACAGACTGGCCTCTGACAGATTATGAATATTTTGAGCAAGCGAATGAGGACTGGTGCAGACAGGATTGCTTGAGTGATTGTTTCTGCGCTCTTGCCATTTTTAGAGGTGCTGGGTGTTGGAAAAAGAAGTTACCCTTCTCCAATGGAAGGAAAGATCCCAGTTTTCAAGCAAAAGCTCTGTTAAAGATAAGAAAAGATAATTCTACCTTCAAATGTGAGGGTCCAGTTAGAAAGAAAGATAAATCTAAGCTGATTATAGTTATCTCCGTGCTTCTAAGCAGTTCAGTGTTAATGAACTTGCTCCTATTAGTGGCGGGTTTTTCAGTTGTATACTGGTGGAGATCTAAGAGTTCTAAGGCAAATCAACCTAGCCAATCCATTGTAGGCACTTGTCTTAGAAGTTTCACTTTTGAAGAGTTGAGGAAGGCAACGAATGGGTTCGAGGAGGTGCTTGGTCAAGGGGCATTTTCAACTGTCTACAAAGGAGTTTCATTTGATCCTACCCGGAGCCACATTGCAGTTAAGAAGCTAAACAACATGGTCAAAGAAAATGAAGAAGAGTTCAAAACAGAGGTAAGTACATTTGGTAGGACAAATCATAGGAATTTGATCCAACTCTTGGGATTTTGCAATGAGGGAGACCACAGAATGCTTGTATATAAGTTCATGAGCAAAGGTTCTTTGGCAAGCTTCCTTTTCGACACCACTGAAAGGCCTAGTTGGTTTCAGAGAATGCAGATAGCATTGGAGACAGCTAGGGGAATCTTGTATTTGCATGAAGAGTGTAGCACTCAGATCATACACTGTGACATTAAACCTCAAAATGTTTTGCTTGATGAATCTTTCACTGCTAAGATATCTGACTTTGGCTTAGCCAAACTTTTGAAAATTGGTCAATCTAGAACCACTACAAGGATAAGGGGAACCAAAGGGTATGTTGCCCCTGAGTGGTTTAGAAACATGCCAATTACCATCAAGGTTGATGTCTACAGTTATGGAGTGCTATTACTAGAGATCATTTGTTGCAGGAGGAGCTTTGAAGCAAATGCTGAGAATGAGAACCAGATGGTGCTGACAGATTGGGCCTATGATTGTTTTCATGAAAGGAAACTTGATTTATTGGTGAAAGATGACAAAGAGGCCTTAGCTGACATGAAGATGGTGGAAAAGTATGTGATGCTTTCTTTATGGTGCATTCAGGAGGATCCATTACTGAGGCCATCCATGAAGAAAATCTTGCAGATGCTTGAAGGGTCTATAGATGTACCAGCCCCTCCTGATTTACCTTCATTGATAACTACCATCAGTCTGTAG 2418 0.4123 MHAMMFLEQKYHLMFCFFLALLPFASVGQSHKNISLGSSHTAQAGDSTWAVSPSGNFAVGFQQIEENGFLLSIWFNQIPQRTIVWSANGGNLAPKGSKVELTSDGFFLLNDPTGNRIWSAGSSGSGTSHAAMVDTGNFVLASQSTEYLWQSFDHPTDTILPGQVLNQPSTLVSRYLETNYSSGRFKFILKDDGNLALYTTQYPWSSSNFNYWNTNTSGSDFSLVFNQSGVLFLRANNGSIISMISSNTPSTQDFYQRAVLEYDGVFRHYAYPKSSNSNTRSWKMAWSTVYYLPPNICLDITEDYGSGACGFNSYCTFDDGKKSCHCPSGYSFIDPADVMKGCRPDFDSQSCDGSSPETDLFDFYEMENTDWPLTDYEYFEQANEDWCRQDCLSDCFCALAIFRGAGCWKKKLPFSNGRKDPSFQAKALLKIRKDNSTFKCEGPVRKKDKSKLIIVISVLLSSSVLMNLLLLVAGFSVVYWWRSKSSKANQPSQSIVGTCLRSFTFEELRKATNGFEEVLGQGAFSTVYKGVSFDPTRSHIAVKKLNNMVKENEEEFKTEVSTFGRTNHRNLIQLLGFCNEGDHRMLVYKFMSKGSLASFLFDTTERPSWFQRMQIALETARGILYLHEECSTQIIHCDIKPQNVLLDESFTAKISDFGLAKLLKIGQSRTTTRIRGTKGYVAPEWFRNMPITIKVDVYSYGVLLLEIICCRRSFEANAENENQMVLTDWAYDCFHERKLDLLVKDDKEALADMKMVEKYVMLSLWCIQEDPLLRPSMKKILQMLEGSIDVPAPPDLPSLITTISL* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0342 805 Pfam D-mannose binding lectin 82 166 IPR001480 -
Ahy4g0342 805 Gene3D Phosphorylase Kinase; domain 1 476 590 - -
Ahy4g0342 805 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 13 798 - -
Ahy4g0342 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Ahy4g0342 805 Gene3D - 33 153 IPR036426 -
Ahy4g0342 805 PIRSF SRK 2 804 IPR024171 GO:0004674
Ahy4g0342 805 SMART serkin_6 513 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0342 805 ProSitePatterns Protein kinases ATP-binding region signature. 519 544 IPR017441 GO:0005524
Ahy4g0342 805 CDD B_lectin 51 155 IPR001480 -
Ahy4g0342 805 ProSiteProfiles Bulb-type lectin domain profile. 33 153 IPR001480 -
Ahy4g0342 805 ProSiteProfiles Protein kinase domain profile. 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0342 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 209 IPR036426 -
Ahy4g0342 805 SUPERFAMILY Protein kinase-like (PK-like) 488 785 IPR011009 -
Ahy4g0342 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 178 276 IPR036426 -
Ahy4g0342 805 Gene3D Transferase(Phosphotransferase) domain 1 591 795 - -
Ahy4g0342 805 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 13 798 - -
Ahy4g0342 805 Gene3D - 155 280 IPR036426 -
Ahy4g0342 805 CDD STKc_IRAK 519 786 - -
Ahy4g0342 805 Pfam Protein kinase domain 516 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0342 805 SMART blect_4 33 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0342 Ahy-Chr4 4413090 4415914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0342 443 789 Receptor kinase-like Gene Family AT5G45780 39.286 2.32e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy4g0342 Pkinase 7.10E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0342 - - adu:107482645 1582