Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0331 ATGGCTAGAATATTATTGAGTATGATATCACTGTTCCTACTTTGCAACATGGGGGGAGAGTGCCACAACAATAAACATGAGTGTGGAAGACACCGTTGTGGACCACAAGGTCCTCCAATTCGTTTTCCATTCCGTCTTAAAGAGAAGGAGCCTCCAGAGTGTGGTGTACCTGGCTTTGATCTCACTTGTGATCATAAGCATAACACCCTCATTGAGTTTTCTTCTGTTGTTCCTCAACTTTCAATTAAACTCCTTGTCATGGAAATAGGTTATGAAACCAACTTTCTATACCTCTCTGACCCCGAAAATTGTCTTGCCAGCAAATTTCTTAAACTAATTAGTACTTCTATTTCTCCTTTTCAATTCCAATTTTATAATGATGATGGTCCATTTTCTATATCTATCTTTAATTGCTCACCCGACGGGCAATATCACTTCTCGTGCCCTGTTTATGTTGCTTTTGACGAGAGCGAGACACTCCTCAGTTCCAACCTTGTATCCTGCACCAAGGTGTTTAACTTGTCCACAAAAATCACGGGCATAGACTCCCTCATGAGAAATCGATTGTTGTTAGAGTGGCCGAAACCAAATTGTACTGTCTGTGAGGCGAGTGGCAAGCAATGCATGCTAAAGAACAATGGTTCCAATGCTGCTTCTGTTGAATGCTATGGGAGTATAACTGGTCCCAAGCTAACCAAGAAGATACTTTTTTACATTGCAGGTCCCGCATTTGGATCATTGCTGCTGCTGCTATTGGCTTTTATGTTGTTTAAGAGCTATCGATACTTCAGAATGAAGGGAGATCAAGCAAGGAGTGCCAAGTTCTTGGAGAATTACAGAGCGCTCAAACCTACTAGATTCTCATACGCTGATATTAAGAGAATCACAAATGGTTTCAAAGACAAGTTAGGGGAAGGAGCTCACGGTGCAGTCTTCAAAGGCAAGCTCTCAAACATTATTGTTGCAGTGAAAGTACTCAACAATACCATAGAGGATGAAGAGAAAGATTTCATCAATGAGGTTGGAACCATTGGCAAAATTCACCATGTTAATGTGGTTCGCTTGCTTGGCTTTTGCGCTCAAGGATTCCATCGTGCTTTAGTCTATGATTTCTTCTCAAAAGGATCACTTGAGAACTTCATCACCACACCAGACAACAATGACATTTTCCTTGGATGGGACAGGTTGCACCAAATTGCTCTTGCTATAGCAAAAGGCATCGAGTATCTTCATCATGGTTGTGAGCAGCAAATCCTTCATTTTAACATCAATCCCCGTAACATCTTGCTTGATGACAGATTCACACCCAAGATTACTGATTTTGGATTAGCCAAGTTATGTTCCAAGGACAAAAGTGCAGTGTCAATGAGCGCAGTTAGGGGAACCTTGGGCTACATTTCTCCTGAAGTTGTATCAAGAAACTTTCGCACTGCCACCAACAAAGCAGACATTTACAGCTATGGAATGTTGCTACTTGAAATGGTGGGAGGGAGAAAGAATATGGTTACAGGAGAAGAGGGACGTTCTCACATCTTGTATCCTGAATGGGTGCATAATTTGATTGATGGGGAAGATGTACATGTGCATGTTGAAGATGAGCATGATATTAAAATTGCAAGGAAGATTGCAATTGTGGGACTTTGGTGCATTAAGTGGGATCCATCAAACCGTCCATCTGCCAAAACTCTTGTAAAAATGCTTGAATCAGATGGAGATAAGCTCACAGTTCCTTGTAATCCTTTTAACTCTAGTGACTCCAGTAGTTCTAGGGGGTGTTTGGCACACGCGTTGGAAGGGAAGAAGCACGTTTAG 1812 0.4167 MARILLSMISLFLLCNMGGECHNNKHECGRHRCGPQGPPIRFPFRLKEKEPPECGVPGFDLTCDHKHNTLIEFSSVVPQLSIKLLVMEIGYETNFLYLSDPENCLASKFLKLISTSISPFQFQFYNDDGPFSISIFNCSPDGQYHFSCPVYVAFDESETLLSSNLVSCTKVFNLSTKITGIDSLMRNRLLLEWPKPNCTVCEASGKQCMLKNNGSNAASVECYGSITGPKLTKKILFYIAGPAFGSLLLLLLAFMLFKSYRYFRMKGDQARSAKFLENYRALKPTRFSYADIKRITNGFKDKLGEGAHGAVFKGKLSNIIVAVKVLNNTIEDEEKDFINEVGTIGKIHHVNVVRLLGFCAQGFHRALVYDFFSKGSLENFITTPDNNDIFLGWDRLHQIALAIAKGIEYLHHGCEQQILHFNINPRNILLDDRFTPKITDFGLAKLCSKDKSAVSMSAVRGTLGYISPEVVSRNFRTATNKADIYSYGMLLLEMVGGRKNMVTGEEGRSHILYPEWVHNLIDGEDVHVHVEDEHDIKIARKIAIVGLWCIKWDPSNRPSAKTLVKMLESDGDKLTVPCNPFNSSDSSSSRGCLAHALEGKKHV* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0331 603 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 591 IPR045874 GO:0004672
Ahy4g0331 603 Gene3D Transferase(Phosphotransferase) domain 1 372 577 - -
Ahy4g0331 603 ProSiteProfiles Protein kinase domain profile. 297 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0331 603 SUPERFAMILY Protein kinase-like (PK-like) 280 568 IPR011009 -
Ahy4g0331 603 Pfam Wall-associated receptor kinase galacturonan-binding 28 98 IPR025287 GO:0030247
Ahy4g0331 603 Pfam Protein kinase domain 300 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0331 603 PANTHER RECEPTOR-LIKE KINASE 16 591 - -
Ahy4g0331 603 Gene3D Phosphorylase Kinase; domain 1 271 371 - -
Ahy4g0331 603 ProSitePatterns Protein kinases ATP-binding region signature. 303 324 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0331 Ahy-Chr4 4181907 4186856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0331 24 580 Receptor kinase-like Gene Family AT5G38260 32.605 8.46e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy4g0331 Pkinase 1.40E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0331 - - adu:107482548 828.935