Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0312 ATGCTGCCTGATCAGAGAAAAAAGGTCATCAAAGCAAATGATGATCTGACACCAGAGCATTACCAGTTTTTCCTCTATCAGCTTCTCCGAGGCTTGAAGTATATACACACAGCAAACGTTTTTCACCGAGACCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCTAGAGTGGCTTTTAATGATACACCCACTGCCATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCCCCTGAGCTGTGCGGATCCTTTTTTTCGAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTGACTGGAAAGCCTCTTTTCCCTGGGAAGAATGTTGTCCATCAATTGGATCTCATGACTGATCTTCTTGGAACACCATCTCTTGAAGCCATTGCTAGAGTAAGGAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGCAAGAAGAAGCCAGTTCCTTTCTCCCAGAAGTTTCCTAATGCAGACCCCCTTGCTCTTCGTTTATTAGAAAGAATGCTGGCCTTTGAGCCTAAAGATCGGCCTTCTGCTGAAGAGGCGTTAGCGGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTGCCCAGCCAGTTACAAAGATGGAATTTGAGTTTGAGAGACGCAGGATAACAAAGGAAGATGTACGAGAACTTATATACCGTGAGATTCTAGAGTACCATCCAAAGATGTTAAAGGAATTTCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCTAGTGCTGTGGACCACTTCAAGAAACAATTTGCATATCTTGAGGAGCATTACGGCAAAGGTGGAACTGTTGCTCCACCGGAGAGGCAACATGCATCGTTACCCAGACCATGTGTGTTGTATTCAGATAACTCGGTACAGAATACGGCTGAGGTGGCAAATGATCTATCCAAGTGTTGTATCAAAGAAGTTGAGAAACCACCCATGGATAGGAGCAGCGCTGTCCCTATGACTCGCCTTCCTTTGCAAGCTCCTCAAAATATTCAAGGTGCTGCGGCAAGGCCTGGAAAAGTTGTTGGTTCAGTAATGCGCTACAACAACTGTGGAGTAGCAGTAACAGCAGAGACTGAGCAGCGGAGGGTTGTTAGGAATCCAACTGTTTCAGCTCAGTATGCTGCTTCGAGCTGCTCATATCCGAGGAGAAGCAACCCTAGCTGTAAAAATGAGAGGGCGGAAGATGATGGGATTGAAGGCTCGAACGGACTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTTGCAGCTGCTCAAGGAGGACCCGGTGGTCAATGGTATTGA 1371 0.4551 MLPDQRKKVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSLEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNADPLALRLLERMLAFEPKDRPSAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNSVQNTAEVANDLSKCCIKEVEKPPMDRSSAVPMTRLPLQAPQNIQGAAARPGKVVGSVMRYNNCGVAVTAETEQRRVVRNPTVSAQYAASSCSYPRRSNPSCKNERAEDDGIEGSNGLQPKPQYMARKVAAAQGGPGGQWY* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0312 456 Gene3D Phosphorylase Kinase; domain 1 233 254 - -
Ahy4g0312 456 SMART serkin_6 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0312 456 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 372 - -
Ahy4g0312 456 MobiDBLite consensus disorder prediction 407 439 - -
Ahy4g0312 456 SUPERFAMILY Protein kinase-like (PK-like) 8 213 IPR011009 -
Ahy4g0312 456 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0312 456 Pfam Protein kinase domain 7 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0312 456 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 372 - -
Ahy4g0312 456 Gene3D Transferase(Phosphotransferase) domain 1 7 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0312 Ahy-Chr4 3884156 3889410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0312 8 456 MAP Kinase Gene Family AT5G19010 76.139 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ahy4g0312 Pkinase 5.30E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0312 - K04371 gmx:100781957 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0394 14 5216510 5221757 Ahy4g0312 4 3884156 3889410 hybridization
Ahy11g2456 11 139562199 139566659 Ahy4g0312 4 3884156 3889410 PCT
Ahy1g2458 1 102851721 102856217 Ahy4g0312 4 3884156 3889410 PCT
Ahy4g0312 4 3884156 3889410 Ahy11g2456 11 139562199 139566659 PCT
Ahy4g0312 4 3884156 3889410 Ahy1g2458 1 102851721 102856217 PCT