Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0289 ATGGGCTGTGTCAATGGCAAGTGTTGTAACCGGTACTCCACACCGTCAGAGGGTGGCTCCAGGGACTACAGAGAACTTGGCCCTTACCGTGCACAAAGGAAGCACATACTCACTCAGAGACCATTGGAGGTAGCTACTGTTCCTTCACATAACTTCACTTTGGAGTATTCTGTTCTAACCCAGAGGGGATACTACCCTGATTCACCTGAGAAGGAAAACCAAGATAGTTTCTGCATTAGGACTCAGATTCAAGGTAACCACAGTGTCCATTTCTTTGGTGTGTATGATGGTCATGGTCAATTTGGTGGACAGTGTGCAAACTTTGTTAAGGATAGGTTAGTAGAAACATTGTCTAGTGACCCTGCATTGTTGGAGGACCCTGTTAAGGCTTACACTTCTGCATTCTTAACAACGAATTACGAACTGCATAACAGTGACGTTGATGATTCAATGAGTGGTACCACTGCAATTACAGTGCTTGTTATTGGTGATACCCTTTATGTAGCTAATGTTGGTGACTCAAGAGCAGTGCTAGCTGTTAAGGACGGGAATAGAATTATTGCTGAGGACTTGTCCTCGGATCAGACACCGTTCCGGAGAGATGAATATGAGAGAGTGAAGCTTTCTGGGGCAAGGGTGTTGAGTGTTGATCAGGTAGAAGGGCTTAAGGATCCAAATATCCAAACTTGGGGCGACGAAGAGAGTCAGGGTGGCGATCCTCCAAGGTTGTGGGTTCAAAATGGAATGTATCCTGGAACTGCTTTCACAAGGAGTGTTGGGGATAATTTGGCAGAGACTATCGGTGTCATTGCTGTTCCTGAGGTGTCAACAGTCCAGCTTACACCGAATCATCTATTCTTTGTTGTTGCAAGTGATGGGATATTTGAGTTCCTATCAAGCCAAACTGTTGTTGACATGGCAGCAAGCTATTCAGATCCCCGTGATGCGTGTGCCGCCATTGCTGGAGAGTCATATAAACTATGGTTGGAACATGAGAACCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCAAATTTAGGTTCATCTCAAGTTGGATCAGGTGACATCAATGCCAGTATGTTAACAAGGTCCAAGAGGGGAAACGGAACATCAGAGACATCCACTACTACTGTGTCGGAAGTTTCTCGTTCTGTGAGGAGTGGAATCTCCGATTTACAGACATGTCAGCATGCAGTCTCAATGAGAAGTCCAGCTATAGTCGCTCCCTCACCAACTGTGTTCAAATAG 1263 0.4505 MGCVNGKCCNRYSTPSEGGSRDYRELGPYRAQRKHILTQRPLEVATVPSHNFTLEYSVLTQRGYYPDSPEKENQDSFCIRTQIQGNHSVHFFGVYDGHGQFGGQCANFVKDRLVETLSSDPALLEDPVKAYTSAFLTTNYELHNSDVDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIIAEDLSSDQTPFRRDEYERVKLSGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDNLAETIGVIAVPEVSTVQLTPNHLFFVVASDGIFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHENRTDDITIIIVQIKGLSNLGSSQVGSGDINASMLTRSKRGNGTSETSTTTVSEVSRSVRSGISDLQTCQHAVSMRSPAIVAPSPTVFK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0289 420 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Ahy4g0289 420 CDD PP2Cc 71 345 IPR001932 -
Ahy4g0289 420 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 23 417 - -
Ahy4g0289 420 Pfam Protein phosphatase 2C 77 320 IPR001932 -
Ahy4g0289 420 Gene3D - 40 347 IPR036457 -
Ahy4g0289 420 SUPERFAMILY PP2C-like 41 347 IPR036457 -
Ahy4g0289 420 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Ahy4g0289 420 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 23 417 - -
Ahy4g0289 420 SMART PP2C_4 51 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0289 Ahy-Chr4 3632457 3635874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0289 1 350 PP2C-type Phosphatase Gene Family AT3G06270 73.938 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0289 - - aprc:113872580 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0369 14 4972203 4975681 Ahy4g0289 4 3632457 3635874 hybridization