Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0279 ATGACTCTTAGCCATGAGCGGCGGGAATCACATCCTTCGCCGAGCAATGGCATCCACAGCCACAACAGCAACGGCAGTTTCGAGAAAAAGCCAACATTTGCAAAGCATTCTATTTCAATAAGATCAAGAAGACATAAACCCGGTTTCTCTGATTCCTTTTCAAGCATTGACTTGAATGGATTAGACACCGAAGAAGGTGGTGGTGGAGGATGTTTAACAGATTACTCTACAAGCAGTGTAGGATCAAGAACACCTTCATCTTCAAGAGCAAGCACTTCTGATTCTGAGGCTCTACCAGGAAGTGGTGGTTCCAATGCTAACAACCAATGGCGTGGTTTCTTCAAGCTTCTCAAGAAAGGCTCACAGATGCCATTTCAACCATTTCACCCTCTTAAGAAGAATGTTCCTAAGTTAACTAGAAGGAAGAGTAAGAGGGTTAGAGAGGATCTCATTCCTTCTTCTTTTGACTCTGAGTTTGCCAACTTCAAATCTTCATGGAAGAATTTCACTCTCTCTGAACTCCAGGCTGCAACTGATGACTTCAGCCATGATAATGTGATTGGGGAGGGAGGGTATGCAGAGGTATACTTAGGAAAATTGGAAGATGGAAACTTTGTTGCCATAAAGAAGCTCACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTTTTGTCTGAGCTTGGAATCATAGTTCATGTGGACCATCCAAACATTGCTAGATTGATTGGATATGGTGTTGAAGGTGGAATGTTCCTTGTTCTTCAGCTCTCTCCACATGGCAGCTTATCATCCATACTTTATGGGCCTAGAGAGAAGCTCAATTGGAGTCTCAGATTTAAGATTATTTTGGGAACTGCCGAGGGACTTTGCTATCTTCATGAGGGATGTCAAAGAAGAATCATTCACAAGGATATCAAGGCTTCTAATATTCTTCTCTCTGAGACTTTTGAGCCTCAGATATCTGATTTTGGCCTAGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTTTCCAAAGTAGAAGGCACATTCGGGTACCTTCCCCCTGAATTCTTCATGCATGGAATAGTAGATGAGAAAACTGATGTATATGCTTATGGTGTGCTATTATTGGAGCTAATCACTGGAAGACAAGCTTTGGATAGCTCACAAAAAAGTCTTATCATGTGGGCAAAGCCTTTGTTAATTGCAAACAACATAAAAGAGCTTGTTGATCCAGTTCTTGAAGACAATTATGATGAAGAGCAGATGGACCTAGTGATCTTAACAGCATCTCAGTGTGTAGAACAATCGTCGGCTCAACGGCCTCTTATGAGTGAGGTGCTACAAATATTAAGAGGGGATGAAGAGAGCTTGAAGTGCATGAAAGAAAGACAAAAGTCAAAAATTCAAAGAACATACTCTGAAGAACTGTTAGATGCAAATGAATACAATTCAACTAAGTATTTGAGTGAGAGTCAGAGCCAAAGAGCACGCCATATGGAGTTTATTCTAAGCAGTAACTCACCCACACAAGAAACGGAACAAAATTGA 1536 0.4134 MTLSHERRESHPSPSNGIHSHNSNGSFEKKPTFAKHSISIRSRRHKPGFSDSFSSIDLNGLDTEEGGGGGCLTDYSTSSVGSRTPSSSRASTSDSEALPGSGGSNANNQWRGFFKLLKKGSQMPFQPFHPLKKNVPKLTRRKSKRVREDLIPSSFDSEFANFKSSWKNFTLSELQAATDDFSHDNVIGEGGYAEVYLGKLEDGNFVAIKKLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSLRFKIILGTAEGLCYLHEGCQRRIIHKDIKASNILLSETFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLIMWAKPLLIANNIKELVDPVLEDNYDEEQMDLVILTASQCVEQSSAQRPLMSEVLQILRGDEESLKCMKERQKSKIQRTYSEELLDANEYNSTKYLSESQSQRARHMEFILSSNSPTQETEQN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0279 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Ahy4g0279 511 Gene3D Transferase(Phosphotransferase) domain 1 258 474 - -
Ahy4g0279 511 Pfam Protein tyrosine and serine/threonine kinase 184 445 IPR001245 GO:0004672|GO:0006468
Ahy4g0279 511 ProSiteProfiles Protein kinase domain profile. 181 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0279 511 MobiDBLite consensus disorder prediction 15 30 - -
Ahy4g0279 511 SUPERFAMILY Protein kinase-like (PK-like) 166 476 IPR011009 -
Ahy4g0279 511 Gene3D Phosphorylase Kinase; domain 1 154 255 - -
Ahy4g0279 511 PANTHER OS08G0249100 PROTEIN 43 484 - -
Ahy4g0279 511 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Ahy4g0279 511 MobiDBLite consensus disorder prediction 1 106 - -
Ahy4g0279 511 MobiDBLite consensus disorder prediction 72 106 - -
Ahy4g0279 511 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 43 484 - -
Ahy4g0279 511 SMART serkin_6 181 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0279 Ahy-Chr4 3539378 3542404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0279 149 490 Trihelix Transcription Factor Family AT5G38560 39.286 3.81e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy4g0279 PK_Tyr_Ser-Thr 2.90E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0279 - - gmx:100776081 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0360 14 4890919 4893804 Ahy4g0279 4 3539378 3542404 hybridization