LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy4g0268	ATGGAATGCAATAAAGAAGAGGCCTTTAGGGCTAAGGATATTGCTATAAAGAAGTTGGAAAGCAAGGATTTTCCAGTGGCTCATAAATTTGCTCTTAAGGCTCAGAAGTTATACCCTGATCTGGAGAATATTGGTCAATTGCTTGCTGTTTGTGATGTACATTGCTCTGCAGAGCAAAAATTGTATGGTAATGAGATTAACTGGTATAAAGTTCTTCAGATTGAGATGACGGCTGATGAGGTAACAATTAAGAAGCAATACAGAAAGTTTGCTCTCCAACTTCATCCTGACAAGAACAAGTTTTCTGGTGCAGAAGCTGCATTCAAGCTGATTGGGGAAGCACAAAGAGTGCTTTTGGATAGAGTAAAACGATCTGACCTTGACAGAAAGTGCAGGGTTGCAATGAACAATGCTACTATGCCATCTCGCCAACAACAGAAAGCTCACATGAATTTTAAACCTACAGTGCAGAACACTGTCAAGCCGAATTTTATGAACACCACCACTTGGCAGGGGCAACAGTCTAGGCAAACATCTCAACAGGAGCTTAATGGTGGTCGCCCTACTTTTTGGACTATATGTTCCTTCTGTTCTGTTAGATATCAGTATTACAGGGAGGTTATGAATAGATCCCTTCGCTGTCAACAATGCAATAGGGTCTTTTTTGCATATGATGTTGGTAGTAAAGGTGCAACTCCAGCAACTAATCCAAGTCCGCAAGCTTCTGGCCAGCAGAATAATGGTTTCAATCATGGTGCTTCCAATGTAGGTGTTGGGTCTCAAGGTAATGTTCATGCTAACAAGTTCAATACAGAGTCTAGGGGGAAAAAACGTGCTACTTCAGATGTCTCGAGGAAGCCAATTGGAAAGAGAAGGAAGCAGGAGTCCAGTGAAAGTGCTGATTCGGTTAGCAGTGATTCAGAAGATGATGTGGTTGTTGAAGATAATGGTTTTACTGATTTACAAAAGAATACAACTTCTAGAGAAAAGCAACCACGTAGATCTACACGACAAAAACATCAGGCTTCAAACAAGGTGAATGCAAGTGCAAGTGACAGTGACAATGATGATGACGATGATGAATCATTTCAACCTTCAAGTAGGTATAAGAGGAATGGATCATCAAATCGTGCTGGTGAAATGAATAATCAGAATGGTTTAGCTTCGGAAAATGAGGATAACAAGGAGGTGAGGAGAAAGGAAGGTGCTGGAGATTCAAACATAGGTGAAGCATCAGCAGATCTTGTCTACCCTGATCCACAGTTTAGTGACTTCGACAAGGACAAGAAAGAGGAGAATTTTAAAGCTGAGCAGGTTTGGGCTATGTATGATACTACAGATGGCATGCCTAGATTCTACGCCATGATAAAAAAAGTTCTATCACCGAGATTCAAGTTGCAGATAAGATGGTTTGAGTCAGATCCAGATGACGAGGATGAAATCAATTGGTCAAATGAGGAATTGCCAATTGCGTGTGGGAAATATAAACTCGGTAAAACTGAAATTTATGAATCTCGTGAAGCATTCTCCCATCAGATTCTTTGGGAAAAGACTGGCCGCAACACTTTTAAAGTGTACCCTAGAAAGGGGGAAACTTGGGCTTTGTTTAAAGACTGGGATATTAAATGGTATGTGGATGCAGAGTCTCATCAGAAGTATGATTTTGAGTTTGTTGAAATCTTGTCGGATTTTGTTGAAGGTGAAGGAGTAGATGTTGCACACTTGGCTAAGTTGAAAGGTTTTGTGAGCCTCTTCTGTCCAATTATGAAGGAAGGTAATTGCTCGTCCCGAATACCATCGGCCCAGTTATTCAGATTTTCTCACAGGGTGCCTTCTTTTAGGATGACTGGTCAGGAAGGATTAGGTGTTCCTGTGGGATCTTTTGAATTTGATCCTTTATCCCTGCCTATGAATCTGGAAGAAGAGATTGATCTTCCGCAAGATTTAAAAGCAAAATCTTGTCACAGTCCTTCTGTTGGGGTGAGCACAAGGTCTTCAGATGCTATGAAATTCAAAATGAAATCTGACAGTGATGCATCTCCATCTAAGGTTAATTTGGAAAGAAGAAACTCAGCATTAAAGAACAAGGCTTCTGTTGATCATATTGATGATGGTGTTGGTCCTTCTGATTCAGTCACAACAGCTGTTGGAATACCCGATTCTCAGTTCTTCAATTTTCATGCCAAGAAGTCCCCTGAAAATTTTCAGATTGGCCAGGTTTGGGCATTTTACCGTGAAAATGATAGAATGCCGAGGTACTACGGTGTGATTATGGGTGTTGGGACTAGCCCCGATCTTGATGTGCGTGTTACTTGGCTTACTAATTACTTGCCACCAAAGGATGCCGTTAAGTGGGAAGACGAGGACATGATCATTTCCTGCGGGCAATTTAAAACGGCAAGTGGAGCTAGTAGTTCCATTGTCTGCAAAAACACCCATTCTTTTTCTCATGAGTTGCATCCTGTTGCTATCGAGGGTAATGGTAAGAATAAGAAGTATACTATTCTCCCGAGAAAAGGTGAAGTTTGGGCATTATATAAGAAATGGTCTGCTAAAATCAGAAGCTCAGATTTGTCAAACTGCGAGTACGACATAGTGGAAGTTGTTGATGAAGATAATAGCTCGGGGATAAAGGTTTTATATTTGGAGAAGCTAAGTGGTTTTAATTCAGTTTTTAAGGGCAAAACCGGTGGAAGATCATCTGCAACTATACCTTCCAAAAGATTTCTCATGTTCTCCCACCAAATCCCTGCTTTCAGATTAACAGAAGAGCATGGCGATTTGGCAAGTTTCCTTGAACTTGATCCTGCAGCTCTACCAACTCATTATTTTAGCTCTAAATGA	2844	0.4086	MECNKEEAFRAKDIAIKKLESKDFPVAHKFALKAQKLYPDLENIGQLLAVCDVHCSAEQKLYGNEINWYKVLQIEMTADEVTIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDRVKRSDLDRKCRVAMNNATMPSRQQQKAHMNFKPTVQNTVKPNFMNTTTWQGQQSRQTSQQELNGGRPTFWTICSFCSVRYQYYREVMNRSLRCQQCNRVFFAYDVGSKGATPATNPSPQASGQQNNGFNHGASNVGVGSQGNVHANKFNTESRGKKRATSDVSRKPIGKRRKQESSESADSVSSDSEDDVVVEDNGFTDLQKNTTSREKQPRRSTRQKHQASNKVNASASDSDNDDDDDESFQPSSRYKRNGSSNRAGEMNNQNGLASENEDNKEVRRKEGAGDSNIGEASADLVYPDPQFSDFDKDKKEENFKAEQVWAMYDTTDGMPRFYAMIKKVLSPRFKLQIRWFESDPDDEDEINWSNEELPIACGKYKLGKTEIYESREAFSHQILWEKTGRNTFKVYPRKGETWALFKDWDIKWYVDAESHQKYDFEFVEILSDFVEGEGVDVAHLAKLKGFVSLFCPIMKEGNCSSRIPSAQLFRFSHRVPSFRMTGQEGLGVPVGSFEFDPLSLPMNLEEEIDLPQDLKAKSCHSPSVGVSTRSSDAMKFKMKSDSDASPSKVNLERRNSALKNKASVDHIDDGVGPSDSVTTAVGIPDSQFFNFHAKKSPENFQIGQVWAFYRENDRMPRYYGVIMGVGTSPDLDVRVTWLTNYLPPKDAVKWEDEDMIISCGQFKTASGASSSIVCKNTHSFSHELHPVAIEGNGKNKKYTILPRKGEVWALYKKWSAKIRSSDLSNCEYDIVEVVDEDNSSGIKVLYLEKLSGFNSVFKGKTGGRSSATIPSKRFLMFSHQIPAFRLTEEHGDLASFLELDPAALPTHYFSSK*	948

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy4g0268	947	MobiDBLite	consensus disorder prediction	270	299	-	-
	Ahy4g0268	947	ProSiteProfiles	dnaJ domain profile.	67	131	IPR001623	-
	Ahy4g0268	947	MobiDBLite	consensus disorder prediction	391	405	-	-
	Ahy4g0268	947	MobiDBLite	consensus disorder prediction	231	430	-	-
	Ahy4g0268	947	Gene3D	DnaJ domain	65	180	IPR036869	-
	Ahy4g0268	947	CDD	DnaJ	67	120	IPR001623	-
	Ahy4g0268	947	PANTHER	-	1	945	-	-
	Ahy4g0268	947	MobiDBLite	consensus disorder prediction	367	390	-	-
	Ahy4g0268	947	SUPERFAMILY	Chaperone J-domain	62	133	IPR036869	-
	Ahy4g0268	947	MobiDBLite	consensus disorder prediction	231	269	-	-
	Ahy4g0268	947	Pfam	DnaJ domain	67	128	IPR001623	-
	Ahy4g0268	947	PRINTS	DnaJ domain signature	69	87	IPR001623	-
	Ahy4g0268	947	PRINTS	DnaJ domain signature	87	102	IPR001623	-
	Ahy4g0268	947	PRINTS	DnaJ domain signature	103	123	IPR001623	-
	Ahy4g0268	947	SMART	dnaj_3	66	123	IPR001623	-
	Ahy4g0268	947	Pfam	Domain of unknown function (DUF3444)	414	619	IPR024593	-
	Ahy4g0268	947	Pfam	Domain of unknown function (DUF3444)	716	924	IPR024593	-
	Ahy4g0268	947	PANTHER	DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN	1	945	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy4g0268	Ahy-Chr4	3394583	3398865	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy4g0268	4	226	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT2G01710	34.211	9.60e-29	117

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy4g0268	-		-	ahf:112795786	1852.8