Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0254 ATGGGGTGTGTGTTTGGGAGACAGTCATCACAAAAGTCCGGTGCGGCGGCAGAAGGGGAAGCGGCGGCGGAGGGGAGAGAGAGGAGAGAGGAAGTGAGGGAAGCAAAAGCAGAAGTGGTTGTTGAGACTCAGAATGGTGGTGGTGGTGGTGGTGGAGAAGAGAAGAGGAGTTCAAGGCAAAGAGGTGAGAGGAGAAGATCTTCAAAACCAAATCCAAGACTGAGTAATCCACCAAACAATGTTCATGGTGAGCAGGTGGCAGCAGGGTGGCCCTCTTGGCTTTCCAAGGTTGCTGGTGAAGCCATCAATGGATTGACCCCTAGGAGAGCTGACACTTTTGAGAAGCTTGATAAGATTGGGCAAGGTACATACAGCAATGTTTACAAGGCTAGGGATACCTTAACGGGAAAGATTGTTGCCCTAAAGAAAGTCCGTTTCGACAATTTGGAGCCCGAGAGTGTGAAATTCATGGCCAGGGAGATTCTGATTCTGCGTCGCCTGGATCATCCCAATGTCGTCAAATTGGAAGGTCTAGTGACTTCTAGAATGTCATGTAGCTTATATCTTGTCTTCGAATACATGGTGCATGATTTGGCTGGACTCGCTACAAATCCAGCGATTAAGTTCACAGAGCCTCAGGTTAAATGTTACATGCAGCAACTATTTTCGGGGCTGGAACATTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGATCAAACCTTCTTATTGACAATGATGGAGTTCTTAAAATTGCTGATTTTGGATTAGCATCGTTCTTTGATCCTCATCACAAGCATCCTATGACCAGTAGAGTGGTGACGTTATGGTATCGTCCTCCCGAACTTCTTCTCGGGGCCACCGAATATGGTGTCGGAGTGGACCTTTGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCCGGAAAGCCAATTATGCCTGGTCGAACAGAGGTGGAACAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGATGAATATTGGAAAAAATCAAAGTTGCCACATGCAACAATTTTTAAACCCCAACAATCGTACAAGCGGTGCATAGCAGATACTTTTAAAGATTTTCCGCCGTCATCCCTTCCACTTATTGAGACCCTTCTTGCAATCGATCCAGCAGAGCGTCTGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAACCTTATGCTTGTGATCCCTCAAGTCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAACTACGTGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCTAATGCTGATGGTGTCAAGAAATCCCGACCACGTGATAGAATTGGCAGGGGAATTCCAGTTCCAGAGGCTAATGCTGAATTGCAAGCAAATATTGATAGACGGAGACAGATAACACATGCGAACGCAAAGAGCAAGAGTGAGAAGTTCCCCCCTCCCCACCAAGATGGAACTCTAGGCTATCCATTGGGTTCTTCGCATCACATGGATCCGGTATTTGATCCTCCCGATGTTCCGTTTAGTTCCACGAACTTCTCACAACCGAAATCAAGTATGCAAACGTGGTCTGGCCCCTTGGTAGAATCTGCCGGCGGCGGTGCACCGAGAAGAAAGAAAAAACACGGTAGGTGA 1656 0.4674 MGCVFGRQSSQKSGAAAEGEAAAEGRERREEVREAKAEVVVETQNGGGGGGGEEKRSSRQRGERRRSSKPNPRLSNPPNNVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTEPQVKCYMQQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGVLKIADFGLASFFDPHHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIADTFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVKKSRPRDRIGRGIPVPEANAELQANIDRRRQITHANAKSKSEKFPPPHQDGTLGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKSSMQTWSGPLVESAGGGAPRRKKKHGR* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0254 551 MobiDBLite consensus disorder prediction 464 486 - -
Ahy4g0254 551 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0254 551 PANTHER CELL DIVISION PROTEIN KINASE 64 550 - -
Ahy4g0254 551 MobiDBLite consensus disorder prediction 1 85 - -
Ahy4g0254 551 SUPERFAMILY Protein kinase-like (PK-like) 108 403 IPR011009 -
Ahy4g0254 551 SMART serkin_6 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0254 551 MobiDBLite consensus disorder prediction 1 15 - -
Ahy4g0254 551 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0254 551 PANTHER CYCLIN-DEPENDENT KINASE 64 550 - -
Ahy4g0254 551 MobiDBLite consensus disorder prediction 514 533 - -
Ahy4g0254 551 MobiDBLite consensus disorder prediction 54 70 - -
Ahy4g0254 551 MobiDBLite consensus disorder prediction 431 452 - -
Ahy4g0254 551 MobiDBLite consensus disorder prediction 431 551 - -
Ahy4g0254 551 Gene3D Phosphorylase Kinase; domain 1 101 195 - -
Ahy4g0254 551 MobiDBLite consensus disorder prediction 21 38 - -
Ahy4g0254 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Ahy4g0254 551 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Ahy4g0254 551 Gene3D Transferase(Phosphotransferase) domain 1 196 436 - -
Ahy4g0254 551 CDD STKc_CDK9_like 113 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0254 Ahy-Chr4 3227752 3232772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0254 108 435 Core Cell Cycle Gene Families AT5G10270 51.744 2.61e-118 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy4g0254 Pkinase 1.60E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0254 K08819 - gmx:100779413 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0334 14 4564953 4569572 Ahy4g0254 4 3227752 3232772 hybridization