Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0252 ATGGCTTCAAATCAGATTCAGTCATCTACTACAATTCATGCAGGGGCAACTAATGATGCTTTATACAAGGAACTGTGGCATGCCTGTGCTGGACCTCTTGTCACTCTTCCTCGTGAAGGGGAAAGGGTTTATTACTTTCCACAAGGTCATATGGAACAGCTCGAGGCATCTATGAATCAAGGTTTAGAGCAGCAAATGCCTTCCTTTAATCTTCCATCTAAGATACTATGTAAAGTGGTCAATGTTCATCTTCGGGCTGAACCTGAAACCGATGAAGTATATGCACAGATAACTTTGCTTCCTGAAGCAGATCAAAGTGAGGTGGTAAGCCCTGATGATCCTCTGCCTGAGCCACCAAGGTGTACAGTCCATTCATTTTGCAAGACACTTACTGCTTCTGACACCAGCACCCATGGAGGTTTCTCTGTTCTTCGAAGACATGCGGATGATTGTCTGCCACCACTGGATATGTCTCAGCAACCACCATGGCAAGAATTGGTTGCAACTGATTTGCATGGGAATGAATGGCATTTTCGGCATATTTTTCGAGGGCAACCAAGACGCCACTTACTGACAACTGGTTGGAGTGTCTTCGTCAGTTCCAAAAAATTAGTGGCTGGTGATGCATTTATATTCTTAAGGGGTGAAAATGGAGAGCTCCGAGTAGGAGTTAGGAGGCTCATGAGACAGCAAAACAACATGCCATCTTCGGTTATATCCAGTCACAGCATGCATCTCGGTGTTCTGGCTACTGCATCTCACGCCATTGCCACCGGAACACTGTTTTCAGTATTTTACAAACCCAGAACAAGCCGGTCGGAGTTTATTGTGAGTATCAATAAATATCTTGAAGCTCGAAATCATAAACTCTCAGTTGGTATGAGATTCAAAATGAGATTTGAAGGTGATGAGGTTCCTGAAAGAAGGTTCAGTGGGACAATTGTTGGCGTTGGAGATAGCACATCATCAGTTTGGGCTGATTCTGAGTGGCGATCGTTGAAGGTTCAATGGGATGAACCATCGTCAATTTTGCGTCCTGATAGAGTTTCTCCATGGGAATTGGAGCCACTTGTATCTACCACCCCAGCAAACTCCCAGCCAGCCCAAAGAACAAAGAGATCGCGGCCTCCGATCCTGCCTTCACCAATGCCTGATTCATCAATGCAAGGTGTATGGAAACCACCAGTTGAATCTCCATCTTTCTCCTATCGCGAACATGGCCGAGACCTCTATCCATCACCTAAATTCAATTCTAATGCAGCCAAATTTCTTGGTTTTGGCGGGAATATCTCTGCACCCAACAAGTCCATATATTGGTTGAATAGGATGGAAAACTCTACAGAATCATTTTCACCTATAGCACTTAAAGAATCTGCTGAAAAGAGACAAGGCACTGGAAATGGCTGTAGACTCTTTGGAATTCAGTTACTTGACAATGCTCATGCAGAAGAAAGTTTGCCAACTGTCACCTTGTCAGTAAGGGTAGGTGATGATAGGTCTGTTCCATCTTTGGATGGTGAGTCTGATCAGCAGTCTGAACCATCAAATGTTAATCAATCGGATATTCCTTCTGCAAGTTGTGATGCTGAAAAATCATGCCTGCGGTCTCCCCAGGAGTCACAAAGCAGGCAAATAAGAAGCTGCACAAAGGTTCACATGCAAGGTATGGCTGTTGGAAGGGCTGTGGATTTGACAAGGTTTGATGGATATGAGGATCTGCTTTGGAAATTGGAAGAGATGTTTGACATCAAGGGTGAGCTCTGTGGATCTGAAAAGAAGTGGCAAGTTGTCTACACTGATAATGAAGATGACATGATGATGGTTGGAGATGATCCATGGCTCTTGCTAATTTACTGCAGTGAGTTCTGTAGTGTCGTGAGGAAAATTTTCATCTACACAGTAGAAGAGGTGAAGAAACTTTCACCGAAAATTGGACTTCCAATTAATGAAGTGGTTAAACCAAGCAAACTGGATGCTGAAGCAGGTGTGAATCCAGAGGATCAGTCATCCGTTGTGGGGCCTGGTTGCTAG 2031 0.4421 MASNQIQSSTTIHAGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVVSPDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQNNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDSTSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTTPANSQPAQRTKRSRPPILPSPMPDSSMQGVWKPPVESPSFSYREHGRDLYPSPKFNSNAAKFLGFGGNISAPNKSIYWLNRMENSTESFSPIALKESAEKRQGTGNGCRLFGIQLLDNAHAEESLPTVTLSVRVGDDRSVPSLDGESDQQSEPSNVNQSDIPSASCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLWKLEEMFDIKGELCGSEKKWQVVYTDNEDDMMMVGDDPWLLLIYCSEFCSVVRKIFIYTVEEVKKLSPKIGLPINEVVKPSKLDAEAGVNPEDQSSVVGPGC* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0252 676 MobiDBLite consensus disorder prediction 358 394 - -
Ahy4g0252 676 Gene3D - 289 362 - -
Ahy4g0252 676 MobiDBLite consensus disorder prediction 358 372 - -
Ahy4g0252 676 PANTHER AUXIN RESPONSE FACTOR 9 9 655 - -
Ahy4g0252 676 MobiDBLite consensus disorder prediction 498 524 - -
Ahy4g0252 676 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Ahy4g0252 676 SMART B3_2 126 228 IPR003340 GO:0003677
Ahy4g0252 676 SUPERFAMILY DNA-binding pseudobarrel domain 115 255 IPR015300 -
Ahy4g0252 676 Gene3D - 541 641 - -
Ahy4g0252 676 Gene3D - 123 228 IPR015300 -
Ahy4g0252 676 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy4g0252 676 MobiDBLite consensus disorder prediction 505 524 - -
Ahy4g0252 676 ProSiteProfiles PB1 domain profile. 546 645 IPR000270 GO:0005515
Ahy4g0252 676 Pfam AUX/IAA family 543 617 IPR033389 -
Ahy4g0252 676 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 655 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy4g0252 676 Pfam B3 DNA binding domain 126 226 IPR003340 GO:0003677
Ahy4g0252 676 SUPERFAMILY CAD & PB1 domains 548 619 - -
Ahy4g0252 676 CDD B3_DNA 124 226 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0252 Ahy-Chr4 3210893 3216101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0252 14 670 B3 DNA Binding Superfamily AT1G59750 72.012 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy4g0252 AUX_IAA 2.30E-08 CL0072