Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0246 ATGTTGATTTTCTTTCCGCTTCACTCGAGTGTAGGATCCAACATTTTCAGGATTAGGGTTTTCAGATATATGGGTTGCATATGCTTCAAAGGGAAATCTGCAGAGGAATACGTTGCAGAGAACCGCATAAGAAGGGGCAAGTCCAAGGCGTTGAAATCAAAGCTTGCGAGTAATTCTCTTCCCCTCATAGACGTTGGGAATGATGCCGTCCAAGGGGAGAACGAAGAGGTTCAGGTGGCTGTGGCACCCACGGTGTTCAGTGTGACCAACGGGGAGCGAGGAGCTCTGGTTATCGCTGGATGGCCCTCTTGGCTCGCTGCCGTTGCTGGGGAAGCCATTAATGGGTGGATTCCACGTAGAGCTGACTCCTTTGAGAAGTTCGATAAGATTGGACAAGGAACTTATAGTAGTGTTTATAGAGCTCGTGATCTTGAAACAAATAAAATTGTTGCATTAAAGAAGGTTCGATTTGCTACTATGGATCCAGAAAGTGTTCGCTTTATGGCAAGGGAAATTCTTTTGCTGCGAAGGCTTGATCATCCAAATGTCATGAAGCTAGAAGGCATGATTACTTCCAGGGTTTCTGGTAGCTTGTACCTTATTTTTGACTATATGGAACATGATCTTGCAGGGCTTGCAGCAATACCTGGCATCAAGTTTTCTGAAGCACAGATCAAATGTTATATGCAACAACTACTTCGTGGTCTTGAGCATTGCCACGGTCGAGGTGTTATGCACCGTGACATCAAGGGCTCAAATCTTCTAGTTGATAATAATGGCCGTTTGAAGATTGGTGATTTTGGACTTGCAACTTCGTTTCAGCCATCTAAGGGGAAGCCTTTAACAAGTCGTGTTGTAACCTTGTGGTACCGACCGCCTGAACTTTTACTCGGAGCTACAGATTATGGAGTTTCTGTGGACTTATGGAGTTCTGGTTGTATTCTTGCTGAATTGTTTTCTGGAAAGGCTATAATGCCTGGACGAACAGAGGTGGAGCAACTTCATAAAATTTTCAAACTTTGTGGGTCTCCTTCTGAAGAATACTGGAAGAAGTCAAAGCTGCGAAATGCAACAATTTTCAAACCTCAACAACCATACAAACGGGTTGTTTCTGAGACATTCAAGAATTTTCCTTCATCTGCACTGGGCCTATTGGAGGTACTTCTTGCTACAGAACCTGAAGATCGAGGAACAGCATCTTTAGCACTTCAAAATGAGTTCTTTACCACAGAGCCACTTCCATGTGATCCATCAACTTTGCCAAATTATCCACCGAGTAAGGAGTTTGATGTCAAACTTCAACAAGAGGAAGCTAGAAGGAGAGAGAGATCAACAAATAAAGAGCGTGAACAAGGATCAGTTAGGAGGAAGTTAAAAGAGTCTAAAAATGTTCTAGCTCCTGATGCTAATGCTGAATTGCAAGCATCAATAGAGAAGCGACAAAGGCAACCTAATTCAAAATCCATTGTTGAAAGCTACAATCCTAAAGAGGATGGCAACTCTGGCTTCCCTCTTGGACTTGCAAAGCCAAGAGTTCTCAGTGTCTTCTCTCATTCCGGCCAGTCAATGCATCCAAGTGCATATGGTTCCTCAAACAATATGAATTTGAAAGAGGAAAATGTTCTTATTGGCTTCAATCATGACTTTGGATCAAGGCACACTGAATTGAGTAAACAAAAATTTCGTTGGCTTGATGGCACACAATTGTCCAAATTTTCTGGTTCATTTGCAGTTCGAGGTGATGGCAATTCGAATGATTTGCTGGATGGACTGAAATTGCACCAAAAGGACTTCAATCCTTTTGAAAAGGATCTTACCATGGGTTATGCTTCCAAAAACAAACGCTTCCACTATTCTGGACCATTGTTGTCACAGGGGGGGGAACATTGA 1890 0.4286 MLIFFPLHSSVGSNIFRIRVFRYMGCICFKGKSAEEYVAENRIRRGKSKALKSKLASNSLPLIDVGNDAVQGENEEVQVAVAPTVFSVTNGERGALVIAGWPSWLAAVAGEAINGWIPRRADSFEKFDKIGQGTYSSVYRARDLETNKIVALKKVRFATMDPESVRFMAREILLLRRLDHPNVMKLEGMITSRVSGSLYLIFDYMEHDLAGLAAIPGIKFSEAQIKCYMQQLLRGLEHCHGRGVMHRDIKGSNLLVDNNGRLKIGDFGLATSFQPSKGKPLTSRVVTLWYRPPELLLGATDYGVSVDLWSSGCILAELFSGKAIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLRNATIFKPQQPYKRVVSETFKNFPSSALGLLEVLLATEPEDRGTASLALQNEFFTTEPLPCDPSTLPNYPPSKEFDVKLQQEEARRRERSTNKEREQGSVRRKLKESKNVLAPDANAELQASIEKRQRQPNSKSIVESYNPKEDGNSGFPLGLAKPRVLSVFSHSGQSMHPSAYGSSNNMNLKEENVLIGFNHDFGSRHTELSKQKFRWLDGTQLSKFSGSFAVRGDGNSNDLLDGLKLHQKDFNPFEKDLTMGYASKNKRFHYSGPLLSQGGEH* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0246 629 Gene3D Phosphorylase Kinase; domain 1 119 211 - -
Ahy4g0246 629 SUPERFAMILY Protein kinase-like (PK-like) 117 416 IPR011009 -
Ahy4g0246 629 CDD STKc_CDK9_like 124 408 - -
Ahy4g0246 629 SMART serkin_6 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0246 629 MobiDBLite consensus disorder prediction 412 500 - -
Ahy4g0246 629 ProSiteProfiles Protein kinase domain profile. 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0246 629 PANTHER CELL DIVISION PROTEIN KINASE 75 584 - -
Ahy4g0246 629 Gene3D Transferase(Phosphotransferase) domain 1 212 448 - -
Ahy4g0246 629 PANTHER KINASE CDK9, PUTATIVE-RELATED 75 584 - -
Ahy4g0246 629 Pfam Protein kinase domain 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0246 629 MobiDBLite consensus disorder prediction 430 463 - -
Ahy4g0246 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Ahy4g0246 629 MobiDBLite consensus disorder prediction 476 495 - -
Ahy4g0246 629 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0246 Ahy-Chr4 3152971 3157528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0246 116 451 Core Cell Cycle Gene Families AT5G10270 49.435 6.67e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy4g0246 Pkinase 4.60E-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0246 - - aip:107638508 1162.9