Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0171 ATGAATTTTTCGGTTCTAAAATCAGCAACATATTCCACAGTGGTTGTTCCAAAACCAGCTTCTCAATCTGATCTCTTTCTTCACTCTAATAACCACCCTTCTCGCCATGCCAGGGCGTTTCTTCCCAGCTTTAATGAGATGCCGCAGAAATCAATGGCGAAGAAGACGGCCTACGAGAAGATAAGGGAGGAGTTGAAACTTGATGCAAAGCCAAAGATGAACTTGGCTTCCTTTGTGACCACGTCAATGGAGGAAGAATGTAACATACTCATGATGGAATCCTTCAACAAGAACTATGTTAACATGGATGAGTACCCTGCCACCACTCAACTTCACAATAGATGTGTGAATATGATAGCACGTTTGTTCAACGCTGAAATTGAAGAAAATGAGAACGCAATTGGAACAGGAACTGTTGGATCTTCAGAGGCCATAATGCTGGCGGGCCTTGCATTCAAGAAAAAATGGCAGAACAAGCTCAAGGCCCAAGGAAAGCCCTATCATAAGCCCAACATGGTCACTGGTGCCAATGTCCAGGTATGTTGGGAAAAATTTGCAATGTATTTCGATGTAGAGTTGAGAAAAGTGGATGTTGGAGAAGGGTATTATGTGATGGACCCTAATAAAGCCATTGAAATGGTTGATGAGAACACTATCTGTGTGGCTGCAGTCTTGGGTTCAACTTATAATGGCGAATTTGAAGATGTCAAGTTGCTTAACGACCTCTTACTACAACAAAACAAGAAAAATGGATGGGATACACCGATTCATGTTGATGCAGCAAGTGGTGGGTTTGTTGCTCCATTTCTTTATCCAGAGCTAGAATGGGATTTCAGGCTTCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGTCTTGTTTATGCAGGCATTGGTTGGGTTATTTGGAGAAGCAAAGAGGACTTGCCTCAAGAGCTTATCTTCAATATTAATTACCTTGGAGCAGACCAACCCACCTTTACCCTTAATTTTTCTAAAGGGTCTAGTCAGATTATTGCACAATATTATCAACTAGTTCACCTTGGCAGAGAGGGATACCAAAGAGTAATGGAAAAGTGCAAAGAAAATGCAATGGTGGTGAAACAAGGATTGGAGAAAACAGGGTGCTTTAACATACTCTCAAAGGACAATGGTGTTCCTCTGGTAGCCTTTTCTCTTAAGGACACAAGCCACGGTGACGAGTTCAAGATATCGGAGATGCTACGCCGCCTCCACGGTTGGGTTGTGCCGGCTTATCCAATGCCATCCGGTGCGGAGCATGTCAATGTGCTCCGCGCCGTGGTTAGAGCTGAGTTTTCGCGCGAGATGGCCGAAAAACTCGTGCTTGACATAGAAAATGTGTTGCAAGAACTTGGGAAGCTTGGTCCCAAGTACACACCAAAAGTGACAAAAATTGCAAAGAGGAAAATCATTGTCCGAGAATCCAACAACAATCACAAAGTCTTGGCAGCATAG 1482 0.4339 MNFSVLKSATYSTVVVPKPASQSDLFLHSNNHPSRHARAFLPSFNEMPQKSMAKKTAYEKIREELKLDAKPKMNLASFVTTSMEEECNILMMESFNKNYVNMDEYPATTQLHNRCVNMIARLFNAEIEENENAIGTGTVGSSEAIMLAGLAFKKKWQNKLKAQGKPYHKPNMVTGANVQVCWEKFAMYFDVELRKVDVGEGYYVMDPNKAIEMVDENTICVAAVLGSTYNGEFEDVKLLNDLLLQQNKKNGWDTPIHVDAASGGFVAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPQELIFNINYLGADQPTFTLNFSKGSSQIIAQYYQLVHLGREGYQRVMEKCKENAMVVKQGLEKTGCFNILSKDNGVPLVAFSLKDTSHGDEFKISEMLRRLHGWVVPAYPMPSGAEHVNVLRAVVRAEFSREMAEKLVLDIENVLQELGKLGPKYTPKVTKIAKRKIIVRESNNNHKVLAA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0171 493 Gene3D - 15 80 - -
Ahy4g0171 493 PANTHER GLUTAMATE DECARBOXYLASE 15 484 IPR010107 GO:0004351|GO:0006536|GO:0030170
Ahy4g0171 493 Gene3D - 376 463 - -
Ahy4g0171 493 Gene3D - 81 375 IPR015421 GO:0003824
Ahy4g0171 493 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 34 460 IPR010107 GO:0004351|GO:0006536|GO:0030170
Ahy4g0171 493 PANTHER GLUTAMATE DECARBOXYLASE 15 484 - -
Ahy4g0171 493 Pfam Pyridoxal-dependent decarboxylase conserved domain 48 396 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy4g0171 493 SUPERFAMILY PLP-dependent transferases 33 460 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0171 Ahy-Chr4 2124630 2129413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0171 14 472 Calmodulin-binding Proteins AT5G17330 70.588 0.0 691