Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0154 ATGGCCACCCCCAAATTACATTCCATAACCCTCCTACCATTTCTCTCTCCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACGCTCTCCATTGCCGACGATGCCGCCGTCATGTCCAACCTCCGCAAGTCACTCACCGGAGCCCCTTCCGACTGGTCCACCACCTCCTTCTGCAAGTGGTCCGGCATCACCTGTGACACCTCCAACCGCGTAACCTCCATCAATCTCCCCAAGAGCTCCATCTCGGGAACCCTCCCTTCCGATCTCAACACCCTCACTCAGCTAACCACTCTCTCCCTCTCCTCAAACGCGCTCTCCGGCGCGTTGCCCTCACTCGCTAACCTCACCATGCTCCAAACCGTACTACTAGACCAAAACAACTTCACCTCAATCACCAAAGCCGCCTTCTCGGGACTCACCAGCCTCCAGGAGCTAAGCATGACCACCAATGTCAACCTCCAGCCCTGGACGATTCCCACCGAGTTGACTCAGTCTACCGAACTCGTCACCCTCGATCTCGGCACCACCAACCTTTTCGGCACCTTGCCGGACTTCTTCGACTCGTTTCCTGGCCTTCAGAACCTCCGCCTCTCCTACAACAAACTCACCGGTCAGCTGCCCCGGTCACTCGCCGGATCTTCCGTACAGAATCTCTGGCTCAACAACCAGGACGACAGCGCTGGGTTTACCGGCACCGTCGATGTACTCGCGTCAATGACGCACTTGAATCAGGTCTGGCTTCAGAAGAATCAGTTTACCGGTCCCATTCCGGATTTGTCAAACTGCACCGATTTGTTCGATTTGCAGCTTCGCGATAACCAGTTAACCGGCGTTGTACCCGTTGCGCTGACCACAATGTCGAGTTTGAGGAACGTTTCTTTGGACAATAACAGACTCCAGGGTCCGACTCCGGCGTTCGGGAAAGATGTGACGGTCACGCTTACTGGGCTCAACAGATTTTGCGCGAAAGCTGGAGAGTCTTGTGATGATAGGGTGAACACCCTTCTTGCCGTTGCGGCCGGGTTTGACTACCCGTACCGGTTGGCGGACTCTTGGGATGGCAACAATCCTTGTAATGATTGGACCTCTGTTGTGTGCGTTGGGGAGAAGATTGTAACCTTGAATTTCAAGAATCTTGATTTGAACGGGACGATCTCGCCGGCTTTGGCGAATTTAACGGATTTGAGGAACTTGTATCTGAATGACAATAATTTGACAGGCTCAATACCGGAGAGTTTGACGAGTTTGGCTCAGCTCGAGGTTCTGGATGTTTCTAATAACAATTTGACAGGGAAGATTCCGAGTTTCCCTTCTAAGGTGAAGTTCAGCCACGGTGGCAATGCTTTGCTTGGGGTTTCTGGTGGAGGTGGAGGAAGTGGGAATGGCTCATCTTCAAATTCTGGTGATGCACCAAGTGGAAGTCCTTCTAAGGCATCGAGTGGTACTTCGCTTTCTCCTGGTTGGATTGTAGGTATAGCCATTATTGCCGTGTTTTTCGTTGCAGTTGTTTTGTTTGTGTTTTGCAAATGTTATGCCAAGAACAGGCACAAGAAATTTGGAAGGGTAAATACCCCTGAAACAGGGAAAGGAGAGGTTAAGATTGATATGGTGGGTGCTTCCAGTTCCAATGGATTTGTGGGAGCAGGGGGAGCAACAAGTGAGTTGCAAAGCCAGGGTAGCGAGCAAAACGAACAGCTCCCTGTTTTTGAAGGTGGGAATGTCACAATTTCGATCCAAGTTCTTAGGCAAGTTACAAATAATTTCAGTGAGGATAACATTTTGGGTAGGGGAGGGTTTGGTGTTGTGTACAAAGGGGAATTGCATGATGGGACTAAGATTGCGGTCAAGAGGATGGAATCGGTTGCAATGGGAACCAAAGGAATGAATGAGTTTCAAGCAGAGATTGCAGTTCTAACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATATTGCATGAATGGCAATGAAAGACTGCTTGTGTATGAGTATATGCCTCAAGGAACACTAACACAGCATCTGTTCGATTGGCATGAGAATGGATGCGCTCCTTTGACATGGAAACAAAGGGTGGCAATAGCCCTAGATGTAGCAAGGGGAGTGGAATACTTGCACAGTTTAGCTCAGCAAAGCTTCATTCATAGAGACTTGAAACCCTCGAACATTCTGTTGGGTGATGACATGAGAGCTAAGGTTGCTGATTTTGGTTTGGTTAAAAATGCACCTGATGGAAAATATTCAGTTGAGACACGGTTAGCTGGAACGTTTGGATATCTTGCACCCGAATATGCAGCTACTGGGAGAGTGACAACAAAAGTCGACGTCTACGCATTTGGGGTAGTTTTGATGGAACTTATTACAGGCAGAAGGGCCTTGGATGATACCGTGCCTGATGATAGGTCACACTTGGTTTCATGGTTCCGCAGGGTACAAATTAACAAGGAGAACATCCCAAAGGCAATTGATCAAACCCTTGATCCTGACGAGGAAACCATGGAGAGCATTTATAAGGTGGCCGAGCTTGCAGGCCATTGCACTGCGCGCGAACCATACCAAAGGCCTGATATGGGGCATGCGGTGAATGTGTTGGTCCCCCTTGTAGAGCAATGGAAGCCTACAAACCATGAAGAAGAAGAAGGTTATGGCATTGATCTCCACATGAGCCTTCCTCAAGCTCTCAGAAGGTGGCAAGCCAATGAAGGTACTTCCACCATGTTCAATGACATGTCCTTCTCCTCACAAACGCAATCGAGCATTCCGGCAAAACCTTCTGGGTTTGCTGACTCCTTTGATTCAATGGATTGCCGGTAA 2823 0.4896 MATPKLHSITLLPFLSPLFFFFFFFFFFFFTLSIADDAAVMSNLRKSLTGAPSDWSTTSFCKWSGITCDTSNRVTSINLPKSSISGTLPSDLNTLTQLTTLSLSSNALSGALPSLANLTMLQTVLLDQNNFTSITKAAFSGLTSLQELSMTTNVNLQPWTIPTELTQSTELVTLDLGTTNLFGTLPDFFDSFPGLQNLRLSYNKLTGQLPRSLAGSSVQNLWLNNQDDSAGFTGTVDVLASMTHLNQVWLQKNQFTGPIPDLSNCTDLFDLQLRDNQLTGVVPVALTTMSSLRNVSLDNNRLQGPTPAFGKDVTVTLTGLNRFCAKAGESCDDRVNTLLAVAAGFDYPYRLADSWDGNNPCNDWTSVVCVGEKIVTLNFKNLDLNGTISPALANLTDLRNLYLNDNNLTGSIPESLTSLAQLEVLDVSNNNLTGKIPSFPSKVKFSHGGNALLGVSGGGGGSGNGSSSNSGDAPSGSPSKASSGTSLSPGWIVGIAIIAVFFVAVVLFVFCKCYAKNRHKKFGRVNTPETGKGEVKIDMVGASSSNGFVGAGGATSELQSQGSEQNEQLPVFEGGNVTISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGTKGMNEFQAEIAVLTKVRHRHLVALLGYCMNGNERLLVYEYMPQGTLTQHLFDWHENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDDRSHLVSWFRRVQINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHEEEEGYGIDLHMSLPQALRRWQANEGTSTMFNDMSFSSQTQSSIPAKPSGFADSFDSMDCR* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0154 940 SMART LRR_typ_2 395 418 IPR003591 -
Ahy4g0154 940 SMART LRR_typ_2 192 215 IPR003591 -
Ahy4g0154 940 SMART LRR_typ_2 95 117 IPR003591 -
Ahy4g0154 940 SMART LRR_typ_2 289 312 IPR003591 -
Ahy4g0154 940 SMART LRR_typ_2 419 441 IPR003591 -
Ahy4g0154 940 SMART LRR_typ_2 118 141 IPR003591 -
Ahy4g0154 940 MobiDBLite consensus disorder prediction 458 482 - -
Ahy4g0154 940 CDD STKc_IRAK 597 870 - -
Ahy4g0154 940 SUPERFAMILY L domain-like 59 436 - -
Ahy4g0154 940 Gene3D Phosphorylase Kinase; domain 1 552 668 - -
Ahy4g0154 940 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Ahy4g0154 940 Pfam Leucine rich repeat N-terminal domain 333 369 IPR013210 -
Ahy4g0154 940 Pfam Leucine rich repeat N-terminal domain 35 69 IPR013210 -
Ahy4g0154 940 PANTHER OSJNBA0070M12.3 PROTEIN 19 940 - -
Ahy4g0154 940 ProSiteProfiles Protein kinase domain profile. 591 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0154 940 ProSitePatterns Protein kinases ATP-binding region signature. 597 619 IPR017441 GO:0005524
Ahy4g0154 940 Gene3D Transferase(Phosphotransferase) domain 1 669 890 - -
Ahy4g0154 940 MobiDBLite consensus disorder prediction 460 482 - -
Ahy4g0154 940 Gene3D Ribonuclease Inhibitor 36 329 IPR032675 -
Ahy4g0154 940 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 19 940 - -
Ahy4g0154 940 MobiDBLite consensus disorder prediction 911 927 - -
Ahy4g0154 940 Pfam Protein tyrosine and serine/threonine kinase 594 865 IPR001245 GO:0004672|GO:0006468
Ahy4g0154 940 Gene3D Ribonuclease Inhibitor 332 456 IPR032675 -
Ahy4g0154 940 SMART serkin_6 591 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0154 940 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Ahy4g0154 940 MobiDBLite consensus disorder prediction 911 940 - -
Ahy4g0154 940 SUPERFAMILY Protein kinase-like (PK-like) 567 876 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0154 Ahy-Chr4 1857257 1861525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0154 74 867 Receptor kinase-like Gene Family AT5G07280 32.598 7.20e-96 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Ahy4g0154 PK_Tyr_Ser-Thr 4.40E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0154 - - gmx:100781851 1309.66