Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0139 ATGGCCTGCTCGCTCCAGCGAAGTTCCATCTTCCTCTTCAACTTTCGACCAAAAAAAAAAAAAAATCTTCCTCTTCAACTAACTTCATCCCATCATCCTACCTCAACCACCTCACCAAACCCCACTTCCTTTGTTTTCCTCTTTCTTCCCAATCTTACCAACTTCTACCACCTCCTCTATGTCATGGACCTGCACCCCGAAACCGCAACGACCTCCTCTCCCACCTTCGCTTCCATCGGCCGCAGGAGCCTCAAGGACATGTCCATTTCCGAGCTCATTTCCGTTCTGCGCGCCGATTTCGACACCGTTGAAGAGGTTTTGTTGGCCAGAGACGCCAAACACAGAGCTGAGATCAGTCCACTTTATGAAAAGATCGAATTAGAGAGGCTAACGAGGCTTCGACTGGAATCGGAGCTGAAGACGAAGCAGGAGGAGCAGCGTTGTCACAGGTGTGAGAGAACACAAGAGGGTTACGAAATGTTGCTGAAGGAAGTGAAGAAGAGCGGGTTGAATGATTATAAGAACAATGCTATTATTGAAGAATTAAGGAACACGAATCGAGAGTTGGAGATTCAAAATAACAAAGCAACTGATGAATTGGCTACGATTAGGATCAGATGCAGTCAATTGGAGAATGCAAGGAATGTGAGTTTGGCTACCATTGAGAAGCTTAGGGTTGAGAATTGCAAATTGAGAAAGGAATTGAATAAAGGGGTTAATGTTGTAGTCAAAGATGAGCAAGACAAGGAATTCAATGAAATGGATGTTTGCGGTTCTGCCTCTTTGCAAAGAATTAAAGACATTGGCCAAGGCCAATCTTCATCAGGTGGACTGTTCTTTAAAGTGTTGGATATGGATTCATGCAACAATGTGTCAGGGGATGCTGCATTTGAAGCTGTTGCTGAGGTTTACTCAGAGAGTGATGACGATGGACATTTAGAACCAGTTCCTAGAATGGAGTTTGATTCCTTAGAAGCTGTTCAGACATTTTACAAGAGGTATGCGAGGCTAATTGGTTTTGGTTGGAAGATCAGGACCTCGAAAAAAGGGTTTGATGGGAGACCAAATTATGTGGTACTTGCATGCACTCGTGGGGATCGCCGTCTATCTAGTATTTCGACAACTCTTCCAACCCAATTCACAAAATGTTCTGCAAAGATCAATGTGAAGAAAGGGAAAGATGGAAAGTGGATGATTAGAAAGGTAGATCTTGAACACAACCACGACTTAAGCCCTTTAAATTTAAAATACTCAGGAAACACGACTATTAGCACACTCATTTAG 1284 0.4346 MACSLQRSSIFLFNFRPKKKKNLPLQLTSSHHPTSTTSPNPTSFVFLFLPNLTNFYHLLYVMDLHPETATTSSPTFASIGRRSLKDMSISELISVLRADFDTVEEVLLARDAKHRAEISPLYEKIELERLTRLRLESELKTKQEEQRCHRCERTQEGYEMLLKEVKKSGLNDYKNNAIIEELRNTNRELEIQNNKATDELATIRIRCSQLENARNVSLATIEKLRVENCKLRKELNKGVNVVVKDEQDKEFNEMDVCGSASLQRIKDIGQGQSSSGGLFFKVLDMDSCNNVSGDAAFEAVAEVYSESDDDGHLEPVPRMEFDSLEAVQTFYKRYARLIGFGWKIRTSKKGFDGRPNYVVLACTRGDRRLSSISTTLPTQFTKCSAKINVKKGKDGKWMIRKVDLEHNHDLSPLNLKYSGNTTISTLI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0139 427 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 222 411 - -
Ahy4g0139 427 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 222 411 - -
Ahy4g0139 427 Pfam FAR1 DNA-binding domain 329 411 IPR004330 -
Ahy4g0139 427 Coils Coil 175 213 - -
Ahy4g0139 427 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0139 Ahy-Chr4 1716703 1720555 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy4g0139 FAR1 6.20E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0139 - - ahf:112795650 805.823