Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0123 ATGCCACCGGGTTTTGAGTACAACATTGATGATCTGTACCAGGAAGCTAAGAGAAGATGGCTGAAGCCGGTGGAAGTGCTATACATTTTGCGGAATCATGACCAGTGCAAGTTCACAAATATTCCCCCTCAAAAGCCAACAAGTGGATCCTTGTTTCTATTTAATAGAAGAATCATGCGTTTCTTCCGGAAAGACGGTTATAATTGGCGGAAGAAAAGGGATGGAAGAACTGTGGGAGAAGCACATGAACGGCTTAAGATTGGAAACGTTGAAATACTAAATTGTTACTATGCACATGGAGAGGAGAACCGTAGTTTCCAGAGGAGGAGCTACTGGATACTGGATCCGGCATATGAGCATATTGTTCTTGTGCATTACAGAGAAACAAAGGAGGGGAACTCAGGTTCTGGACCTATCCCACCATTGTCTGGAGGCTCCTCTCCTGAATTTAGTCAGAATCGAAGCTCACGTACTACGCTTGACCCAGGGACAATATCCGTGTTTGTTGATTCATGTGAACCTTCTCAGAATTTCTCCAGTCCCGAGTCTATGGAAGTTACCTCTAATATCATCAGAAACAATGGAATGGATCAGTTAGATAAAACAGATGCAGTCTTGCGCCAATTGAAGCAACAGTTAAGTTTGGAAAAGGAGAACTGTGAAGAAATTTCTCCCACATACAATGAGCCTGAGATTTTACATGATTTGAACCCTCAGCATGATGAAAGAGTGATGTACAAGCATAAATCTGCAGCTTTCACTGTGCCAAATGATTATGGACAAGCCGCTTATGAATGCAATGGAAGACAAGATGCAAATGAAAATGCCTTATCTTGGACAGAGGTGCTTGAGTCGTGTAAGCCTGCAAGCTTGACCAATTTACCAGAGCAACATGCATATGAGGCATATGGAAATGATAGCTCCCTACATTCTTCACGAGGTGTACTGATTGACAGTCAAGAAAACAGTCAGTGGATAAACTCCAACAGTATTAATGCTGAAAACTCTGTCTTCTCTTGTCCTCAAGATGGTGGAACTAAATTTCCTCTGTATTCACCAGTTGAAGCTGAAGAACTTAGTTCTGACTATGCGACATTGTTTCATCAAATCCAAATTCCACCACCTCTGGATGCAGATTCATGCCTGACTATTTCACAGAAACAAAAATTCACAATTAGGAGAATCTTCCCAGAGTGGTGTTATGCCACAGAGACTTCAAAGGTGGTCATTATTGGGTCATTTCTCTGTGTTCCCTCAAATTCTACCTGGGCTTGTATGTTTGGTGATATTGAAGTGCCTGCTGAGATAATTCAGGATGGTGTTATTTGTTGTGAAGCTCCCCCCCACCTTCCTGGAAAGGTTACTCTGTGCGTTACTTCTGGAAATCGGGAGTCCTGCAGTGAATTTCGAGAGTTTGAGTTTCGCAATAAGACTAATAGTTGCACTCGTTGTAACTCGATGGAAACAGAAACTGCTAGAAGCCAAGACGAGCTGTTATTACTTGTTACATTTGCACAGATGCTCCTTTCTCCTCCAACTGAAAAGAATGACAACATGGAACCTGTATATCATCTTCCAGTGGAACAGAAAGCAGATGATGATTCATGGAGCCATGTGATAGAGGCTCTTCTAGTAGGCAGTGGAACTTCATCAGGTACTATTGATTGGCTTCTTGAAGAGCTGCTGAAGGATAGGCTACAGCTGTGGCTTTCTGGCAAATCCTGGGAAATAGATGAAGCAATCGGCTGCCCTTTGTCCAAGAAAGAGCAGGGGATTATACACATGGTTGCTGGATTGGGTTATGAGTGGGCCTTGATCCCTATTCTCAGTTGTGGTGTGAATATAAATTTTCGTGACATCAGGGGGTGGACTGCCCTTCATTGGGCTGCACGGTTTGGAAGGGAAAAAATGGTTGCTTCACTTATTGCTGCTGGTGCATATGCTGGAGCAGTAACTGATCCAACATCTGCAGACCCAGATGGGAAAACTGCTGCAGCTATTGCTGCCAGCAATGGCCATAAGGGACTGGCCGGTTATCTTTCAGAAGTAGCTCTGACTAGCCATCTTTCATCTCTCACCTTGAAAGAGTGTGAGATTGCTAAAGATACTGCTGAGATTGAAGCAGAGTTAACCGTCAATCATGTCTCAAAAGAAAATTTTGGATTCACAGCTGATGGGGTTTCACTGGCTGCTGTCAGAAATGCTGCTCTCGCTGCTGCTCGGATACAGGCTGCATTTCGTGCTCATTCTTTCAAAAAACGGAGGGAGAGGGAAGCTGCTGCAGCAGCCGCTGCCGCTGCTGCTGGTCTAGATGGGTATGATATCGATGCTGATGGCATTGGTAACATTCTAGAGCTTTCTCCCAGGTTAAGTCATAGCTTTGGGAGGCTTCGTGATTACAATGCAGCTGCTTTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCTTAGCACTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTCGGAAGCAATACAAGATAATAGTATGGGCAGTTGGAGTCTTGGAGAAGGTAGTGCTACGATGGCGGAGAAAAGGAGCTGGTCTACGAGGTTACCGACAAGACTCGATTGATGAAAATGACGATGATGATTTTCTCAAGGTGTTCAGGAAGCAGAAAGTGCATGTAGCAATTGAAAAAGCTTTTTCACGGGTGCTGTCCATGGTCCATTCTAATGGTGCCCGTCAACAATATCGCCGCATGCTTGAGATGTATCGTGAAGCTAAGGCTGAACTTGGTAGCATGAATGATGAAGCGCCATTAACGACGTCTGTAGGGGACACATCAAATATAGATGATGATGATGAACTCTTTCAAATTCCCGGGGGCTGGGAGACACTCTAG 2898 0.442 MPPGFEYNIDDLYQEAKRRWLKPVEVLYILRNHDQCKFTNIPPQKPTSGSLFLFNRRIMRFFRKDGYNWRKKRDGRTVGEAHERLKIGNVEILNCYYAHGEENRSFQRRSYWILDPAYEHIVLVHYRETKEGNSGSGPIPPLSGGSSPEFSQNRSSRTTLDPGTISVFVDSCEPSQNFSSPESMEVTSNIIRNNGMDQLDKTDAVLRQLKQQLSLEKENCEEISPTYNEPEILHDLNPQHDERVMYKHKSAAFTVPNDYGQAAYECNGRQDANENALSWTEVLESCKPASLTNLPEQHAYEAYGNDSSLHSSRGVLIDSQENSQWINSNSINAENSVFSCPQDGGTKFPLYSPVEAEELSSDYATLFHQIQIPPPLDADSCLTISQKQKFTIRRIFPEWCYATETSKVVIIGSFLCVPSNSTWACMFGDIEVPAEIIQDGVICCEAPPHLPGKVTLCVTSGNRESCSEFREFEFRNKTNSCTRCNSMETETARSQDELLLLVTFAQMLLSPPTEKNDNMEPVYHLPVEQKADDDSWSHVIEALLVGSGTSSGTIDWLLEELLKDRLQLWLSGKSWEIDEAIGCPLSKKEQGIIHMVAGLGYEWALIPILSCGVNINFRDIRGWTALHWAARFGREKMVASLIAAGAYAGAVTDPTSADPDGKTAAAIAASNGHKGLAGYLSEVALTSHLSSLTLKECEIAKDTAEIEAELTVNHVSKENFGFTADGVSLAAVRNAALAAARIQAAFRAHSFKKRREREAAAAAAAAAAGLDGYDIDADGIGNILELSPRLSHSFGRLRDYNAAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKQYKIIVWAVGVLEKVVLRWRRKGAGLRGYRQDSIDENDDDDFLKVFRKQKVHVAIEKAFSRVLSMVHSNGARQQYRRMLEMYREAKAELGSMNDEAPLTTSVGDTSNIDDDDELFQIPGGWETL* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0123 965 ProSiteProfiles Ankyrin repeat profile. 621 653 IPR002110 GO:0005515
Ahy4g0123 965 MobiDBLite consensus disorder prediction 139 162 - -
Ahy4g0123 965 Coils Coil 199 219 - -
Ahy4g0123 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 796 851 IPR027417 -
Ahy4g0123 965 ProSiteProfiles Ankyrin repeat region circular profile. 621 646 - -
Ahy4g0123 965 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Ahy4g0123 965 Gene3D - 480 683 IPR036770 -
Ahy4g0123 965 PANTHER CALMODULIN-BINDING PROTEIN 1 957 - -
Ahy4g0123 965 SMART CG_1_2 12 130 IPR005559 GO:0003677
Ahy4g0123 965 ProSiteProfiles IQ motif profile. 823 847 IPR000048 GO:0005515
Ahy4g0123 965 SMART ANK_2a 621 653 IPR002110 GO:0005515
Ahy4g0123 965 SMART ANK_2a 660 689 IPR002110 GO:0005515
Ahy4g0123 965 Pfam IQ calmodulin-binding motif 825 844 IPR000048 GO:0005515
Ahy4g0123 965 Pfam IQ calmodulin-binding motif 802 820 IPR000048 GO:0005515
Ahy4g0123 965 Gene3D - 800 847 - -
Ahy4g0123 965 ProSiteProfiles IQ motif profile. 738 764 IPR000048 GO:0005515
Ahy4g0123 965 MobiDBLite consensus disorder prediction 130 162 - -
Ahy4g0123 965 Pfam Ankyrin repeats (3 copies) 598 681 IPR002110 GO:0005515
Ahy4g0123 965 Gene3D Immunoglobulins 385 479 IPR013783 -
Ahy4g0123 965 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 957 - -
Ahy4g0123 965 SUPERFAMILY Ankyrin repeat 592 682 IPR036770 -
Ahy4g0123 965 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Ahy4g0123 965 Coils Coil 916 936 - -
Ahy4g0123 965 Pfam IPT/TIG domain 391 465 IPR002909 -
Ahy4g0123 965 ProSiteProfiles IQ motif profile. 800 829 IPR000048 GO:0005515
Ahy4g0123 965 SUPERFAMILY E set domains 391 475 IPR014756 -
Ahy4g0123 965 CDD IPT 391 475 - -
Ahy4g0123 965 SMART iq_5 822 844 IPR000048 GO:0005515
Ahy4g0123 965 SMART iq_5 799 821 IPR000048 GO:0005515
Ahy4g0123 965 SMART iq_5 734 756 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0123 Ahy-Chr4 1506475 1514928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0123 5 958 CAMTA Transcription Factor Family AT1G67310 49.753 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Ahy4g0123 CG-1 5.50E-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0123 K21596 - gmx:100791430 1180.62