Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0062 ATGTTCACGGATGCAATAGGGAATGCAGGGTACTCTCTGCTGAAGGATTTAAGAGCTGAAATTGAAGTGAAGGATGGAACTTTTTCTCTCTGCTTTTGGGTTTATTTGGCCAACTCAACTACATTTCCTGCTACCATTATTCAGCAGGTTTGCTCTGATGTTTCTGAAAGTGCTCCTTTCCTTGTTATAAATGATCACAAGAGAATTAATCTTCTACCGCTTCTTCTCTTACATGAAGAAGCTCCTGATACTGGCAATATCAATTCCTTGACGGAAGTTGCATATGCAACTGTAGATTTTGAGTTTCCATTGCAAAATTGGGTTCACATTGGATGTGAGGTTTGCCCTAATCACATGAAACTACAGATTAATGGAGAGATTGTTGGAGAAAAACCGCTGTCATCAAATAAGGAACCCAGTTCAAATGATTTGAGGAAAATAGTTTTGGCAAATATTGGTGGAGATGGAAATATTTCACACGGTTATGTGTACAATTTTCAAGTTTTCCCTTCTGTTTCATCTATTAAAGATCACCATATGAAGGATCCTCCTCTAAAGTTATCTATTGATGAGTCATCTGCCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGAGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGACGTTGTACTATTAGATGTTTTTGGCCAACCTGTTGATAAGGAGAATGAGCAGGTTTATGCTTCACTTTTGTATGCTGACACGCGGGCACCAGTGGAGAATACAATTGATGAAGAAGCACCCATTTTGGCTAGCTATGATGGAATTGAATTTCCTTCTTATGAAAGACCGAGTAAACTTTTACTGGGCCGTGCATCTTTTAAGCTGAAGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAAATTCTGTGTTCCAAAATTAGGGAATTATCCTTTTTTTGAGGCACTCTCCCGTCCAATTCGATGCATCTCCAGGAGTCGTAATACCCGATTGTCTACCCTGGTGTGGAAAAGGTCACCTGGTCTTGCTAAGCATAATTTAATCCAATCTTCAGGAATGGATGATGCATCCTTTGAACATCAGCATCCTGTTTGTGAGGCAAAATCTAATCCATTAACGAAGCGATTCAGATTTGGACATGACAAGATATCTGTATCAGTGAAGGCTGACACCAACGTAGAGCAACCTGACGAGGAATGTAATTCTCATGCCCGGACTACTAATCAGGTTGAGAATGGGCTTACAACTGGCTTGTATGGCACACCTGCTAACTACGAGGCATATGAGACTCTGTCTGATTCAGAGAGTATAGGGGAGAGAAATTCACCTTCAAATAATGTAGCAAGTAGAAGATATCCAATATCTGACATGACTGTTTTTAAGTACTGCTTGGCTGGCTTAGCTGAGAGATCGCTGATGCTTAAGGAGATTGCATCCTTGGCCTCAAAGAAAGAAATTTCAGAGTTGGCCCATCATGTGTCACTTTATTCAGGATGTTCACACCATAGAAATCAAATATTAATTGCCAAAAAATTGGTGGAAGATGGAACTAATCTTTGGAAGGTGATGTCTCCAAACAACAACCACGTTCCTTGGGAGAGTGCAGTATATGAGATTGAAGAGCAATTCATGAAGATTGCTTCTTGCAGTTCGCGATCTCTCTCACATCAGGACCTAGAGCTTCTAAGAGTTATTGCTGGATGTCAAGAGTATTTAGCCCAAGAAAACTTTGAGAAGTTATGGTGCTGGTTGTACCCTGTGGCTTACATAATTTCAAAGGAGCGGATAAACCCTATCTGGAATTCTACATCACCTAAGTGGATAGAAGGATTCATAACTAAGGAGGAAGCAGAAGCTTCGCTTCAAGGTCCCACAGGACTTCAAGAACCAGGTACATTTGTATTGAGATTCCCCACCTCAAGAAGCTGGCCCCACCCAGATGCAGGTAGCCTAATTGTCACATATGTTGGCAATGATTACAAACTTCACCACAGGCTACTCTCGGTGGATCGTGTTTTTGGCTCTGGTGATAAAGGAATCGACATGAAGCCACTCCAAGCTATGCTACTGGAAGAACCTGAGTTGACTCGATTGGGAAGGATAATAAGAGGCCATTAG 2133 0.413 MFTDAIGNAGYSLLKDLRAEIEVKDGTFSLCFWVYLANSTTFPATIIQQVCSDVSESAPFLVINDHKRINLLPLLLLHEEAPDTGNINSLTEVAYATVDFEFPLQNWVHIGCEVCPNHMKLQINGEIVGEKPLSSNKEPSSNDLRKIVLANIGGDGNISHGYVYNFQVFPSVSSIKDHHMKDPPLKLSIDESSASEIEEESDGVWSIVGGKASCRRNFSLDVVLLDVFGQPVDKENEQVYASLLYADTRAPVENTIDEEAPILASYDGIEFPSYERPSKLLLGRASFKLKISQLSSKCDNRLFLIKFCVPKLGNYPFFEALSRPIRCISRSRNTRLSTLVWKRSPGLAKHNLIQSSGMDDASFEHQHPVCEAKSNPLTKRFRFGHDKISVSVKADTNVEQPDEECNSHARTTNQVENGLTTGLYGTPANYEAYETLSDSESIGERNSPSNNVASRRYPISDMTVFKYCLAGLAERSLMLKEIASLASKKEISELAHHVSLYSGCSHHRNQILIAKKLVEDGTNLWKVMSPNNNHVPWESAVYEIEEQFMKIASCSSRSLSHQDLELLRVIAGCQEYLAQENFEKLWCWLYPVAYIISKERINPIWNSTSPKWIEGFITKEEAEASLQGPTGLQEPGTFVLRFPTSRSWPHPDAGSLIVTYVGNDYKLHHRLLSVDRVFGSGDKGIDMKPLQAMLLEEPELTRLGRIIRGH* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0062 710 ProSiteProfiles Src homology 2 (SH2) domain profile. 612 710 IPR000980 -
Ahy4g0062 710 Gene3D SH2 domain 597 707 IPR036860 -
Ahy4g0062 710 SUPERFAMILY SH2 domain 606 674 IPR036860 -
Ahy4g0062 710 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 8 707 IPR001217 GO:0003700|GO:0006355|GO:0007165
Ahy4g0062 710 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 8 707 - -
Ahy4g0062 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 172 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0062 Ahy-Chr4 712241 729802 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Ahy4g0062 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0062 - - gmx:100803169 1117.06